Node Proximity Is All You Need: Unified Structural and Positional Node
and Graph Embedding
- URL: http://arxiv.org/abs/2102.13582v1
- Date: Fri, 26 Feb 2021 16:48:39 GMT
- Title: Node Proximity Is All You Need: Unified Structural and Positional Node
and Graph Embedding
- Authors: Jing Zhu, Xingyu Lu, Mark Heimann, Danai Koutra
- Abstract summary: We present PhUSION, a proximity-based unified framework for computing structural and positional node embeddings.
By aggregating the PhUSION node embeddings, we obtain graph-level features that model information lost by previous graph feature learning and kernel methods.
- Score: 18.25557372049711
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: While most network embedding techniques model the relative positions of nodes
in a network, recently there has been significant interest in structural
embeddings that model node role equivalences, irrespective of their distances
to any specific nodes. We present PhUSION, a proximity-based unified framework
for computing structural and positional node embeddings, which leverages
well-established methods for calculating node proximity scores. Clarifying a
point of contention in the literature, we show which step of PhUSION produces
the different kinds of embeddings and what steps can be used by both. Moreover,
by aggregating the PhUSION node embeddings, we obtain graph-level features that
model information lost by previous graph feature learning and kernel methods.
In a comprehensive empirical study with over 10 datasets, 4 tasks, and 35
methods, we systematically reveal successful design choices for node and
graph-level machine learning with embeddings.
Related papers
- Deep Manifold Graph Auto-Encoder for Attributed Graph Embedding [51.75091298017941]
This paper proposes a novel Deep Manifold (Variational) Graph Auto-Encoder (DMVGAE/DMGAE) for attributed graph data.
The proposed method surpasses state-of-the-art baseline algorithms by a significant margin on different downstream tasks across popular datasets.
arXiv Detail & Related papers (2024-01-12T17:57:07Z) - GraphRARE: Reinforcement Learning Enhanced Graph Neural Network with Relative Entropy [21.553180564868306]
GraphRARE is a framework built upon node relative entropy and deep reinforcement learning.
An innovative node relative entropy is used to measure mutual information between node pairs.
A deep reinforcement learning-based algorithm is developed to optimize the graph topology.
arXiv Detail & Related papers (2023-12-15T11:30:18Z) - SHGNN: Structure-Aware Heterogeneous Graph Neural Network [77.78459918119536]
This paper proposes a novel Structure-Aware Heterogeneous Graph Neural Network (SHGNN) to address the above limitations.
We first utilize a feature propagation module to capture the local structure information of intermediate nodes in the meta-path.
Next, we use a tree-attention aggregator to incorporate the graph structure information into the aggregation module on the meta-path.
Finally, we leverage a meta-path aggregator to fuse the information aggregated from different meta-paths.
arXiv Detail & Related papers (2021-12-12T14:18:18Z) - Topic-aware latent models for representation learning on networks [5.304857921982132]
We introduce TNE, a generic framework to enhance the embeddings of nodes acquired by means of random walk-based approaches with topic-based information.
We evaluate our methodology in two downstream tasks: node classification and link prediction.
arXiv Detail & Related papers (2021-11-10T08:52:52Z) - Learning Sparse Graphs with a Core-periphery Structure [14.112444998191698]
We propose a generative model for data associated with core-periphery structured networks.
We infer a sparse graph and nodal core scores that induce dense (sparse) connections in core parts of the network.
arXiv Detail & Related papers (2021-10-08T10:41:30Z) - Reasoning Graph Networks for Kinship Verification: from Star-shaped to
Hierarchical [85.0376670244522]
We investigate the problem of facial kinship verification by learning hierarchical reasoning graph networks.
We develop a Star-shaped Reasoning Graph Network (S-RGN) to exploit more powerful and flexible capacity.
We also develop a Hierarchical Reasoning Graph Network (H-RGN) to exploit more powerful and flexible capacity.
arXiv Detail & Related papers (2021-09-06T03:16:56Z) - Node2Seq: Towards Trainable Convolutions in Graph Neural Networks [59.378148590027735]
We propose a graph network layer, known as Node2Seq, to learn node embeddings with explicitly trainable weights for different neighboring nodes.
For a target node, our method sorts its neighboring nodes via attention mechanism and then employs 1D convolutional neural networks (CNNs) to enable explicit weights for information aggregation.
In addition, we propose to incorporate non-local information for feature learning in an adaptive manner based on the attention scores.
arXiv Detail & Related papers (2021-01-06T03:05:37Z) - DINE: A Framework for Deep Incomplete Network Embedding [33.97952453310253]
We propose a Deep Incomplete Network Embedding method, namely DINE.
We first complete the missing part including both nodes and edges in a partially observable network by using the expectation-maximization framework.
We evaluate DINE over three networks on multi-label classification and link prediction tasks.
arXiv Detail & Related papers (2020-08-09T04:59:35Z) - Representation Learning of Graphs Using Graph Convolutional Multilayer
Networks Based on Motifs [17.823543937167848]
mGCMN is a novel framework which utilizes node feature information and the higher order local structure of the graph.
It will greatly improve the learning efficiency of the graph neural network and promote a brand-new learning mode establishment.
arXiv Detail & Related papers (2020-07-31T04:18:20Z) - Graph Neural Networks with Composite Kernels [60.81504431653264]
We re-interpret node aggregation from the perspective of kernel weighting.
We present a framework to consider feature similarity in an aggregation scheme.
We propose feature aggregation as the composition of the original neighbor-based kernel and a learnable kernel to encode feature similarities in a feature space.
arXiv Detail & Related papers (2020-05-16T04:44:29Z) - Graph Inference Learning for Semi-supervised Classification [50.55765399527556]
We propose a Graph Inference Learning framework to boost the performance of semi-supervised node classification.
For learning the inference process, we introduce meta-optimization on structure relations from training nodes to validation nodes.
Comprehensive evaluations on four benchmark datasets demonstrate the superiority of our proposed GIL when compared against state-of-the-art methods.
arXiv Detail & Related papers (2020-01-17T02:52:30Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.