MONAI Label: A framework for AI-assisted Interactive Labeling of 3D Medical Images

• URL: http://arxiv.org/abs/2203.12362v2
• Date: Fri, 28 Apr 2023 22:42:45 GMT
• Title: MONAI Label: A framework for AI-assisted Interactive Labeling of 3D Medical Images
• Authors: Andres Diaz-Pinto, Sachidanand Alle, Vishwesh Nath, Yucheng Tang, Alvin Ihsani, Muhammad Asad, Fernando P\'erez-Garc\'ia, Pritesh Mehta, Wenqi Li, Mona Flores, Holger R. Roth, Tom Vercauteren, Daguang Xu, Prerna Dogra, Sebastien Ourselin, Andrew Feng and M. Jorge Cardoso
• Abstract summary: The lack of annotated datasets is a major bottleneck for training new task-specific supervised machine learning models. We present MONAI Label, a free and open-source framework that facilitates the development of applications based on artificial intelligence (AI) models.
• Score: 49.664220687980006
• License: http://creativecommons.org/licenses/by-sa/4.0/
• Abstract: The lack of annotated datasets is a major bottleneck for training new task-specific supervised machine learning models, considering that manual annotation is extremely expensive and time-consuming. To address this problem, we present MONAI Label, a free and open-source framework that facilitates the development of applications based on artificial intelligence (AI) models that aim at reducing the time required to annotate radiology datasets. Through MONAI Label, researchers can develop AI annotation applications focusing on their domain of expertise. It allows researchers to readily deploy their apps as services, which can be made available to clinicians via their preferred user interface. Currently, MONAI Label readily supports locally installed (3D Slicer) and web-based (OHIF) frontends and offers two active learning strategies to facilitate and speed up the training of segmentation algorithms. MONAI Label allows researchers to make incremental improvements to their AI-based annotation application by making them available to other researchers and clinicians alike. Additionally, MONAI Label provides sample AI-based interactive and non-interactive labeling applications, that can be used directly off the shelf, as plug-and-play to any given dataset. Significant reduced annotation times using the interactive model can be observed on two public datasets.

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