Graph Convolution Based Cross-Network Multi-Scale Feature Fusion for
Deep Vessel Segmentation
- URL: http://arxiv.org/abs/2301.02393v1
- Date: Fri, 6 Jan 2023 05:56:50 GMT
- Title: Graph Convolution Based Cross-Network Multi-Scale Feature Fusion for
Deep Vessel Segmentation
- Authors: Gangming Zhao, Kongming Liang, Chengwei Pan, Fandong Zhang, Xianpeng
Wu, Xinyang Hu, and Yizhou Yu
- Abstract summary: Vessels reconstructed using existing methods are often not sufficiently accurate to meet clinical use standards.
Our network consists of two cascadedworks performing initial and refined segmentation respectively.
Cross-network multi-scale feature fusion is performed between these two U-shaped networks to effectively support high-quality vessel segmentation.
- Score: 36.12106059822428
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Vessel segmentation is widely used to help with vascular disease diagnosis.
Vessels reconstructed using existing methods are often not sufficiently
accurate to meet clinical use standards. This is because 3D vessel structures
are highly complicated and exhibit unique characteristics, including sparsity
and anisotropy. In this paper, we propose a novel hybrid deep neural network
for vessel segmentation. Our network consists of two cascaded subnetworks
performing initial and refined segmentation respectively. The second subnetwork
further has two tightly coupled components, a traditional CNN-based U-Net and a
graph U-Net. Cross-network multi-scale feature fusion is performed between
these two U-shaped networks to effectively support high-quality vessel
segmentation. The entire cascaded network can be trained from end to end. The
graph in the second subnetwork is constructed according to a vessel probability
map as well as appearance and semantic similarities in the original CT volume.
To tackle the challenges caused by the sparsity and anisotropy of vessels, a
higher percentage of graph nodes are distributed in areas that potentially
contain vessels while a higher percentage of edges follow the orientation of
potential nearbyvessels. Extensive experiments demonstrate our deep network
achieves state-of-the-art 3D vessel segmentation performance on multiple public
and in-house datasets.
Related papers
- MDFI-Net: Multiscale Differential Feature Interaction Network for Accurate Retinal Vessel Segmentation [3.152646316470194]
This paper proposes a feature-enhanced interaction network based on DPCN, named MDFI-Net.
The proposed MDFI-Net achieves segmentation performance superior to state-of-the-art methods on public datasets.
arXiv Detail & Related papers (2024-10-20T16:42:22Z) - Two-Stream Graph Convolutional Network for Intra-oral Scanner Image
Segmentation [133.02190910009384]
We propose a two-stream graph convolutional network (i.e., TSGCN) to handle inter-view confusion between different raw attributes.
Our TSGCN significantly outperforms state-of-the-art methods in 3D tooth (surface) segmentation.
arXiv Detail & Related papers (2022-04-19T10:41:09Z) - SPNet: A novel deep neural network for retinal vessel segmentation based
on shared decoder and pyramid-like loss [13.021014899410684]
convolutional neural networks have shown significant ability to extract the blood vessel structure.
We propose a novel deep neural network for retinal vessel segmentation based on shared decoder and pyramid-like loss.
arXiv Detail & Related papers (2022-02-19T03:44:34Z) - Hepatic vessel segmentation based on 3Dswin-transformer with inductive
biased multi-head self-attention [46.46365941681487]
We propose a robust end-to-end vessel segmentation network called Indu BIased Multi-Head Attention Vessel Net.
We introduce the voxel-wise embedding rather than patch-wise embedding to locate precise liver vessel voxels.
On the other hand, we propose inductive biased multi-head self-attention which learns inductive biased relative positional embedding from absolute position embedding.
arXiv Detail & Related papers (2021-11-05T10:17:08Z) - TSGCNet: Discriminative Geometric Feature Learning with Two-Stream
GraphConvolutional Network for 3D Dental Model Segmentation [141.2690520327948]
We propose a two-stream graph convolutional network (TSGCNet) to learn multi-view information from different geometric attributes.
We evaluate our proposed TSGCNet on a real-patient dataset of dental models acquired by 3D intraoral scanners.
arXiv Detail & Related papers (2020-12-26T08:02:56Z) - Learning Hybrid Representations for Automatic 3D Vessel Centerline
Extraction [57.74609918453932]
Automatic blood vessel extraction from 3D medical images is crucial for vascular disease diagnoses.
Existing methods may suffer from discontinuities of extracted vessels when segmenting such thin tubular structures from 3D images.
We argue that preserving the continuity of extracted vessels requires to take into account the global geometry.
We propose a hybrid representation learning approach to address this challenge.
arXiv Detail & Related papers (2020-12-14T05:22:49Z) - clDice -- A Novel Topology-Preserving Loss Function for Tubular
Structure Segmentation [57.20783326661043]
We introduce a novel similarity measure termed centerlineDice (short clDice)
We theoretically prove that clDice guarantees topology preservation up to homotopy equivalence for binary 2D and 3D segmentation.
We benchmark the soft-clDice loss on five public datasets, including vessels, roads and neurons (2D and 3D)
arXiv Detail & Related papers (2020-03-16T16:27:49Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.