DMCVR: Morphology-Guided Diffusion Model for 3D Cardiac Volume
Reconstruction
- URL: http://arxiv.org/abs/2308.09223v1
- Date: Fri, 18 Aug 2023 00:48:30 GMT
- Title: DMCVR: Morphology-Guided Diffusion Model for 3D Cardiac Volume
Reconstruction
- Authors: Xiaoxiao He, Chaowei Tan, Ligong Han, Bo Liu, Leon Axel, Kang Li,
Dimitris N. Metaxas
- Abstract summary: Current cardiac MRI-based reconstruction technology is 2D with limited through-plane resolution.
We propose a morphology-guided diffusion model for 3D cardiac volume reconstruction, DMCVR, that synthesizes high-resolution 2D images and corresponding 3D reconstructed volumes.
- Score: 33.59945107137013
- License: http://creativecommons.org/licenses/by-nc-sa/4.0/
- Abstract: Accurate 3D cardiac reconstruction from cine magnetic resonance imaging
(cMRI) is crucial for improved cardiovascular disease diagnosis and
understanding of the heart's motion. However, current cardiac MRI-based
reconstruction technology used in clinical settings is 2D with limited
through-plane resolution, resulting in low-quality reconstructed cardiac
volumes. To better reconstruct 3D cardiac volumes from sparse 2D image stacks,
we propose a morphology-guided diffusion model for 3D cardiac volume
reconstruction, DMCVR, that synthesizes high-resolution 2D images and
corresponding 3D reconstructed volumes. Our method outperforms previous
approaches by conditioning the cardiac morphology on the generative model,
eliminating the time-consuming iterative optimization process of the latent
code, and improving generation quality. The learned latent spaces provide
global semantics, local cardiac morphology and details of each 2D cMRI slice
with highly interpretable value to reconstruct 3D cardiac shape. Our
experiments show that DMCVR is highly effective in several aspects, such as 2D
generation and 3D reconstruction performance. With DMCVR, we can produce
high-resolution 3D cardiac MRI reconstructions, surpassing current techniques.
Our proposed framework has great potential for improving the accuracy of
cardiac disease diagnosis and treatment planning. Code can be accessed at
https://github.com/hexiaoxiao-cs/DMCVR.
Related papers
- Epicardium Prompt-guided Real-time Cardiac Ultrasound Frame-to-volume Registration [50.602074919305636]
This paper introduces a lightweight end-to-end Cardiac Ultrasound frame-to-volume Registration network, termed CU-Reg.
We use epicardium prompt-guided anatomical clues to reinforce the interaction of 2D sparse and 3D dense features, followed by a voxel-wise local-global aggregation of enhanced features.
arXiv Detail & Related papers (2024-06-20T17:47:30Z) - 3D Vessel Reconstruction from Sparse-View Dynamic DSA Images via Vessel Probability Guided Attenuation Learning [79.60829508459753]
Current commercial Digital Subtraction Angiography (DSA) systems typically demand hundreds of scanning views to perform reconstruction.
The dynamic blood flow and insufficient input of sparse-view DSA images present significant challenges to the 3D vessel reconstruction task.
We propose to use a time-agnostic vessel probability field to solve this problem effectively.
arXiv Detail & Related papers (2024-05-17T11:23:33Z) - Volumetric Reconstruction Resolves Off-Resonance Artifacts in Static and
Dynamic PROPELLER MRI [76.60362295758596]
Off-resonance artifacts in magnetic resonance imaging (MRI) are visual distortions that occur when the actual resonant frequencies of spins within the imaging volume differ from the expected frequencies used to encode spatial information.
We propose to resolve these artifacts by lifting the 2D MRI reconstruction problem to 3D, introducing an additional "spectral" dimension to model this off-resonance.
arXiv Detail & Related papers (2023-11-22T05:44:51Z) - Continuous 3D Myocardial Motion Tracking via Echocardiography [30.19879953016694]
Myocardial motion tracking is an essential clinical tool in the prevention and detection of cardiovascular diseases.
Current techniques suffer from incomplete and inaccurate motion estimation of the myocardium in both spatial and temporal dimensions.
This paper introduces the Neural Cardiac Motion Field (NeuralCMF) to model the 3D structure and the comprehensive 6D forward/backward motion of the heart.
arXiv Detail & Related papers (2023-10-04T13:11:20Z) - Improving 3D Imaging with Pre-Trained Perpendicular 2D Diffusion Models [52.529394863331326]
We propose a novel approach using two perpendicular pre-trained 2D diffusion models to solve the 3D inverse problem.
Our method is highly effective for 3D medical image reconstruction tasks, including MRI Z-axis super-resolution, compressed sensing MRI, and sparse-view CT.
arXiv Detail & Related papers (2023-03-15T08:28:06Z) - Attentive Symmetric Autoencoder for Brain MRI Segmentation [56.02577247523737]
We propose a novel Attentive Symmetric Auto-encoder based on Vision Transformer (ViT) for 3D brain MRI segmentation tasks.
In the pre-training stage, the proposed auto-encoder pays more attention to reconstruct the informative patches according to the gradient metrics.
Experimental results show that our proposed attentive symmetric auto-encoder outperforms the state-of-the-art self-supervised learning methods and medical image segmentation models.
arXiv Detail & Related papers (2022-09-19T09:43:19Z) - MulViMotion: Shape-aware 3D Myocardial Motion Tracking from Multi-View
Cardiac MRI [11.685829837689404]
We propose a novel multi-view motion estimation network (MulViMotion) to learn a consistent 3D motion field of the heart.
We extensively evaluate the proposed method on 2D cine CMR images from 580 subjects of the UK Biobank study for 3D motion tracking of the left ventricular myocardium.
arXiv Detail & Related papers (2022-07-29T18:29:52Z) - Efficient Pix2Vox++ for 3D Cardiac Reconstruction from 2D echo views [0.6524460254566904]
Reconstructing cardiac anatomy in 3D can enable discovery of new biomarkers.
Most ultrasound systems only have 2D imaging capabilities.
We propose a pipeline to perform reconstruction of 3D anatomy from 2D standard cardiac views.
arXiv Detail & Related papers (2022-07-27T10:05:46Z) - DeepRecon: Joint 2D Cardiac Segmentation and 3D Volume Reconstruction
via A Structure-Specific Generative Method [12.26150675728958]
We propose an end-to-end latent-space-based framework, DeepRecon, that generates multiple clinically essential outcomes.
Our method identifies the optimal latent representation of the cine image that contains accurate semantic information for cardiac structures.
In particular, our model jointly generates synthetic images with accurate semantic information and segmentation of the cardiac structures.
arXiv Detail & Related papers (2022-06-14T20:46:11Z) - CNN-based Cardiac Motion Extraction to Generate Deformable Geometric
Left Ventricle Myocardial Models from Cine MRI [0.0]
We propose a framework for the development of patient-specific geometric models of LV myocardium from cine cardiac MR images.
We use the VoxelMorph-based convolutional neural network (CNN) to propagate the isosurface mesh and volume mesh of the end-diastole frame to the subsequent frames of the cardiac cycle.
arXiv Detail & Related papers (2021-03-30T21:34:29Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.