Are GNNs doomed by the topology of their input graph?
- URL: http://arxiv.org/abs/2502.17739v1
- Date: Tue, 25 Feb 2025 00:19:03 GMT
- Title: Are GNNs doomed by the topology of their input graph?
- Authors: Amine Mohamed Aboussalah, Abdessalam Ed-dib,
- Abstract summary: We show how local topological features interact with the message-passing scheme to produce global phenomena such as oversmoothing or expressive representations.<n>Our empirical experiments validate these insights, highlighting the practical implications of graph topology on Graph Neural Networks (GNNs) performance.
- Score: 3.0846824529023382
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Graph Neural Networks (GNNs) have demonstrated remarkable success in learning from graph-structured data. However, the influence of the input graph's topology on GNN behavior remains poorly understood. In this work, we explore whether GNNs are inherently limited by the structure of their input graphs, focusing on how local topological features interact with the message-passing scheme to produce global phenomena such as oversmoothing or expressive representations. We introduce the concept of $k$-hop similarity and investigate whether locally similar neighborhoods lead to consistent node representations. This interaction can result in either effective learning or inevitable oversmoothing, depending on the inherent properties of the graph. Our empirical experiments validate these insights, highlighting the practical implications of graph topology on GNN performance.
Related papers
- On the Topology Awareness and Generalization Performance of Graph Neural Networks [6.598758004828656]
We introduce a comprehensive framework to characterize the topology awareness of GNNs across any topological feature.
We conduct a case study using the intrinsic graph metric the shortest path distance on various benchmark datasets.
arXiv Detail & Related papers (2024-03-07T13:33:30Z) - Information Flow in Graph Neural Networks: A Clinical Triage Use Case [49.86931948849343]
Graph Neural Networks (GNNs) have gained popularity in healthcare and other domains due to their ability to process multi-modal and multi-relational graphs.
We investigate how the flow of embedding information within GNNs affects the prediction of links in Knowledge Graphs (KGs)
Our results demonstrate that incorporating domain knowledge into the GNN connectivity leads to better performance than using the same connectivity as the KG or allowing unconstrained embedding propagation.
arXiv Detail & Related papers (2023-09-12T09:18:12Z) - DEGREE: Decomposition Based Explanation For Graph Neural Networks [55.38873296761104]
We propose DEGREE to provide a faithful explanation for GNN predictions.
By decomposing the information generation and aggregation mechanism of GNNs, DEGREE allows tracking the contributions of specific components of the input graph to the final prediction.
We also design a subgraph level interpretation algorithm to reveal complex interactions between graph nodes that are overlooked by previous methods.
arXiv Detail & Related papers (2023-05-22T10:29:52Z) - Graph Neural Networks can Recover the Hidden Features Solely from the Graph Structure [17.912507269030577]
Graph Neural Networks (GNNs) are popular models for graph learning problems.
We show that GNNs can fully exploit the graph structure by themselves.
In effect, GNNs can use both the hidden and explicit node features for downstream tasks.
arXiv Detail & Related papers (2023-01-26T06:28:41Z) - Discovering the Representation Bottleneck of Graph Neural Networks from
Multi-order Interactions [51.597480162777074]
Graph neural networks (GNNs) rely on the message passing paradigm to propagate node features and build interactions.
Recent works point out that different graph learning tasks require different ranges of interactions between nodes.
We study two common graph construction methods in scientific domains, i.e., emphK-nearest neighbor (KNN) graphs and emphfully-connected (FC) graphs.
arXiv Detail & Related papers (2022-05-15T11:38:14Z) - Graph Neural Networks for Graphs with Heterophily: A Survey [98.45621222357397]
We provide a comprehensive review of graph neural networks (GNNs) for heterophilic graphs.
Specifically, we propose a systematic taxonomy that essentially governs existing heterophilic GNN models.
We discuss the correlation between graph heterophily and various graph research domains, aiming to facilitate the development of more effective GNNs.
arXiv Detail & Related papers (2022-02-14T23:07:47Z) - Edge-Level Explanations for Graph Neural Networks by Extending
Explainability Methods for Convolutional Neural Networks [33.20913249848369]
Graph Neural Networks (GNNs) are deep learning models that take graph data as inputs, and they are applied to various tasks such as traffic prediction and molecular property prediction.
We extend explainability methods for CNNs, such as Local Interpretable Model-Agnostic Explanations (LIME), Gradient-Based Saliency Maps, and Gradient-Weighted Class Activation Mapping (Grad-CAM) to GNNs.
The experimental results indicate that the LIME-based approach is the most efficient explainability method for multiple tasks in the real-world situation, outperforming even the state-of-the
arXiv Detail & Related papers (2021-11-01T06:27:29Z) - XGNN: Towards Model-Level Explanations of Graph Neural Networks [113.51160387804484]
Graphs neural networks (GNNs) learn node features by aggregating and combining neighbor information.
GNNs are mostly treated as black-boxes and lack human intelligible explanations.
We propose a novel approach, known as XGNN, to interpret GNNs at the model-level.
arXiv Detail & Related papers (2020-06-03T23:52:43Z) - Graphs, Convolutions, and Neural Networks: From Graph Filters to Graph
Neural Networks [183.97265247061847]
We leverage graph signal processing to characterize the representation space of graph neural networks (GNNs)
We discuss the role of graph convolutional filters in GNNs and show that any architecture built with such filters has the fundamental properties of permutation equivariance and stability to changes in the topology.
We also study the use of GNNs in recommender systems and learning decentralized controllers for robot swarms.
arXiv Detail & Related papers (2020-03-08T13:02:15Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.