Importance of localized dilatation and distensibility in identifying determinants of thoracic aortic aneurysm with neural operators
- URL: http://arxiv.org/abs/2509.26576v1
- Date: Tue, 30 Sep 2025 17:34:59 GMT
- Title: Importance of localized dilatation and distensibility in identifying determinants of thoracic aortic aneurysm with neural operators
- Authors: David S. Li, Somdatta Goswami, Qianying Cao, Vivek Oommen, Roland Assi, Jay D. Humphrey, George E. Karniadakis,
- Abstract summary: Thoracic aortic aneurysms (TAAs) arise from diverse mechanical and mechanobiological disruptions to the aortic wall.<n>Here, we use a finite element framework to generate synthetic TAAs from hundreds of heterogeneous insults.<n>We construct spatial maps of localized dilatation and distensibility to train neural networks that predict the initiating combined insult.
- Score: 0.12491670910781398
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Thoracic aortic aneurysms (TAAs) arise from diverse mechanical and mechanobiological disruptions to the aortic wall that increase the risk of dissection or rupture. Evidence links TAA development to dysfunctions in the aortic mechanotransduction axis, including loss of elastic fiber integrity and cell-matrix connections. Because distinct insults create different mechanical vulnerabilities, there is a critical need to identify interacting factors that drive progression. Here, we use a finite element framework to generate synthetic TAAs from hundreds of heterogeneous insults spanning varying degrees of elastic fiber damage and impaired mechanosensing. From these simulations, we construct spatial maps of localized dilatation and distensibility to train neural networks that predict the initiating combined insult. We compare several architectures (Deep Operator Networks, UNets, and Laplace Neural Operators) and multiple input data formats to define a standard for future subject-specific modeling. We also quantify predictive performance when networks are trained using only geometric data (dilatation) versus both geometric and mechanical data (dilatation plus distensibility). Across all networks, prediction errors are significantly higher when trained on dilatation alone, underscoring the added value of distensibility information. Among the tested models, UNet consistently provides the highest accuracy across all data formats. These findings highlight the importance of acquiring full-field measurements of both dilatation and distensibility in TAA assessment to reveal the mechanobiological drivers of disease and support the development of personalized treatment strategies.
Related papers
- A Semantically Enhanced Generative Foundation Model Improves Pathological Image Synthesis [82.01597026329158]
We introduce a Correlation-Regulated Alignment Framework for Tissue Synthesis (CRAFTS) for pathology-specific text-to-image synthesis.<n>CRAFTS incorporates a novel alignment mechanism that suppresses semantic drift to ensure biological accuracy.<n>This model generates diverse pathological images spanning 30 cancer types, with quality rigorously validated by objective metrics and pathologist evaluations.
arXiv Detail & Related papers (2025-12-15T10:22:43Z) - A Physics-Informed Loss Function for Boundary-Consistent and Robust Artery Segmentation in DSA Sequences [6.154694408048338]
We propose a novel textitPhysics-Informed Loss (PIL) that models the interaction between the predicted and ground-truth boundaries.<n>PIL consistently outperforms conventional loss functions such as Cross-Entropy, Dice, Active Contour, and Surface losses.
arXiv Detail & Related papers (2025-11-25T17:08:14Z) - Deconstructing Intraocular Pressure: A Non-invasive Multi-Stage Probabilistic Inverse Framework [0.0]
Glaucoma is a leading cause of irreversible blindness driven by elevated intraocular pressure (IOP)<n>We develop a framework to noninvasively estimate unmeasurable variables from sparse, routine data.<n>Our framework achieves excellent agreement with state-of-the-art tonography with precision comparable to direct physical instruments.
arXiv Detail & Related papers (2025-09-17T16:50:23Z) - Causal Operator Discovery in Partial Differential Equations via Counterfactual Physics-Informed Neural Networks [0.0]
We develop a principled framework for discovering causal structure in partial differential equations (PDEs) using physics-informed neural networks and counterfactual minimizations.<n>We validate the framework on both synthetic and real-world datasets across climate dynamics, tumor diffusion, and ocean flows.<n>This work positions causal PDE discovery as a tractable and interpretable inference task grounded in structural causal models and variational residual analysis.
arXiv Detail & Related papers (2025-06-25T07:15:42Z) - Adjustment for Confounding using Pre-Trained Representations [2.916285040262091]
We investigate how latent features from pre-trained neural networks can be leveraged to adjust for sources of confounding.<n>We show that neural networks can achieve fast convergence rates by adapting to intrinsic notions of sparsity and dimension of the learning problem.
arXiv Detail & Related papers (2025-06-17T09:11:17Z) - TxPert: Leveraging Biochemical Relationships for Out-of-Distribution Transcriptomic Perturbation Prediction [11.083533122552396]
We present TxPert, a new state-of-the-art method that leverages multiple biological knowledge networks to predict responses under OOD scenarios.<n>In particular, we present: (i) TxPert, a new state-of-the-art method that leverages multiple biological knowledge networks to predict responses under OOD scenarios; (ii) an in-depth analysis demonstrating the impact of graphs, model architecture, and data on performance; and (iii) an expanded benchmarking framework that strengthens evaluation standards for perturbation modeling.
arXiv Detail & Related papers (2025-05-20T21:13:23Z) - Large-Scale Targeted Cause Discovery with Data-Driven Learning [66.86881771339145]
We propose a novel machine learning approach for inferring causal variables of a target variable from observations.<n>By employing a local-inference strategy, our approach scales with linear complexity in the number of variables, efficiently scaling up to thousands of variables.<n> Empirical results demonstrate superior performance in identifying causal relationships within large-scale gene regulatory networks.
arXiv Detail & Related papers (2024-08-29T02:21:11Z) - Seeing Unseen: Discover Novel Biomedical Concepts via
Geometry-Constrained Probabilistic Modeling [53.7117640028211]
We present a geometry-constrained probabilistic modeling treatment to resolve the identified issues.
We incorporate a suite of critical geometric properties to impose proper constraints on the layout of constructed embedding space.
A spectral graph-theoretic method is devised to estimate the number of potential novel classes.
arXiv Detail & Related papers (2024-03-02T00:56:05Z) - Bayesian Networks for the robust and unbiased prediction of depression
and its symptoms utilizing speech and multimodal data [65.28160163774274]
We apply a Bayesian framework to capture the relationships between depression, depression symptoms, and features derived from speech, facial expression and cognitive game data collected at thymia.
arXiv Detail & Related papers (2022-11-09T14:48:13Z) - Differentiable Agent-based Epidemiology [71.81552021144589]
We introduce GradABM: a scalable, differentiable design for agent-based modeling that is amenable to gradient-based learning with automatic differentiation.
GradABM can quickly simulate million-size populations in few seconds on commodity hardware, integrate with deep neural networks and ingest heterogeneous data sources.
arXiv Detail & Related papers (2022-07-20T07:32:02Z) - Neural operator learning of heterogeneous mechanobiological insults
contributing to aortic aneurysms [0.15658704610960567]
Thoracic aortic aneurysm (TAA) is a localized dilatation of the aorta resulting from compromised wall composition, structure, and function.
We present an integrated framework to train a deep operator network (DeepONet)-based surrogate model to identify contributing factors for TAA.
We show that the proposed approach can predict patient-specific mechanobiological insult profile with a high accuracy.
arXiv Detail & Related papers (2022-05-08T04:37:49Z) - The Causal Neural Connection: Expressiveness, Learnability, and
Inference [125.57815987218756]
An object called structural causal model (SCM) represents a collection of mechanisms and sources of random variation of the system under investigation.
In this paper, we show that the causal hierarchy theorem (Thm. 1, Bareinboim et al., 2020) still holds for neural models.
We introduce a special type of SCM called a neural causal model (NCM), and formalize a new type of inductive bias to encode structural constraints necessary for performing causal inferences.
arXiv Detail & Related papers (2021-07-02T01:55:18Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.