Graph Deep Learning for Intracranial Aneurysm Blood Flow Simulation and Risk Assessment
- URL: http://arxiv.org/abs/2512.09013v1
- Date: Tue, 09 Dec 2025 18:31:35 GMT
- Title: Graph Deep Learning for Intracranial Aneurysm Blood Flow Simulation and Risk Assessment
- Authors: Paul Garnier, Pablo Jeken-Rico, Vincent Lannelongue, Chiara Faitini, Aurèle Goetz, Lea Chanvillard, Ramy Nemer, Jonathan Viquerat, Ugo Pelissier, Philippe Meliga, Jacques Sédat, Thomas Liebig, Yves Chau, Elie Hachem,
- Abstract summary: Intracranial aneurysms are a major cause of neurological morbidity and mortality worldwide.<n> Conventional computational fluid dynamics simulations provide accurate insights but are prohibitively slow and require specialized expertise.<n>We present a graph neural network surrogate model that bridges this gap by reproducing full-field hemodynamics directly from vascular geometries.
- Score: 2.759923839023361
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Intracranial aneurysms remain a major cause of neurological morbidity and mortality worldwide, where rupture risk is tightly coupled to local hemodynamics particularly wall shear stress and oscillatory shear index. Conventional computational fluid dynamics simulations provide accurate insights but are prohibitively slow and require specialized expertise. Clinical imaging alternatives such as 4D Flow MRI offer direct in-vivo measurements, yet their spatial resolution remains insufficient to capture the fine-scale shear patterns that drive endothelial remodeling and rupture risk while being extremely impractical and expensive. We present a graph neural network surrogate model that bridges this gap by reproducing full-field hemodynamics directly from vascular geometries in less than one minute per cardiac cycle. Trained on a comprehensive dataset of high-fidelity simulations of patient-specific aneurysms, our architecture combines graph transformers with autoregressive predictions to accurately simulate blood flow, wall shear stress, and oscillatory shear index. The model generalizes across unseen patient geometries and inflow conditions without mesh-specific calibration. Beyond accelerating simulation, our framework establishes the foundation for clinically interpretable hemodynamic prediction. By enabling near real-time inference integrated with existing imaging pipelines, it allows direct comparison with hospital phase-diagram assessments and extends them with physically grounded, high-resolution flow fields. This work transforms high-fidelity simulations from an expert-only research tool into a deployable, data-driven decision support system. Our full pipeline delivers high-resolution hemodynamic predictions within minutes of patient imaging, without requiring computational specialists, marking a step-change toward real-time, bedside aneurysm analysis.
Related papers
- Scalable Spatio-Temporal SE(3) Diffusion for Long-Horizon Protein Dynamics [51.85385061275941]
Molecular dynamics (MD) simulations remain the gold standard for studying protein dynamics.<n>Recent generative models have shown promise in accelerating simulations, yet they struggle with long-horizon generation.<n>We present STAR-MD, a scalable diffusion model that generates physically plausible protein trajectories over micro-scale timescales.
arXiv Detail & Related papers (2026-02-02T14:13:28Z) - Wall Shear Stress Estimation in Abdominal Aortic Aneurysms: Towards Generalisable Neural Surrogate Models [2.2742404315918923]
Abdominal aortic aneurysms (AAAs) are pathologic dilatations of the abdominal aorta posing a high fatality risk upon rupture.<n>We propose a geometric deep learning approach to estimating hemodynamics in AAA patients, and study its generalisability to common factors of real-world variation.
arXiv Detail & Related papers (2025-07-30T16:32:47Z) - X$^{2}$-Gaussian: 4D Radiative Gaussian Splatting for Continuous-time Tomographic Reconstruction [64.2059940799033]
Current methods discretize temporal resolution into fixed phases with respiratory gating devices.<n>X$2$-Gaussian, a novel framework, enables continuous-time 4DCT reconstruction by integrating dynamic radiative splatting with self-supervised respiratory motion learning.
arXiv Detail & Related papers (2025-03-27T17:59:57Z) - Leveraging Cardiovascular Simulations for In-Vivo Prediction of Cardiac Biomarkers [43.17768785084301]
We train an amortized neural posterior estimator on a newly built large dataset of cardiac simulations.<n>We incorporate elements modeling effects to better align simulated data with real-world measurements.<n>The proposed framework can further integrate in-vivo data sources to refine its predictive capabilities on real-world data.
arXiv Detail & Related papers (2024-12-23T13:05:17Z) - Mesh-Informed Reduced Order Models for Aneurysm Rupture Risk Prediction [0.0]
We use computational fluid dynamics (CFD) to predict the risk of aortic aneurysm growth.<n>We exploit the natural graph structure of the mesh obtained by the Finite Volume (FV) discretization.<n>Our method confirms as a valid alternative that overcomes the curse of dimensionality.
arXiv Detail & Related papers (2024-10-04T09:39:15Z) - REST: Efficient and Accelerated EEG Seizure Analysis through Residual State Updates [54.96885726053036]
This paper introduces a novel graph-based residual state update mechanism (REST) for real-time EEG signal analysis.
By leveraging a combination of graph neural networks and recurrent structures, REST efficiently captures both non-Euclidean geometry and temporal dependencies within EEG data.
Our model demonstrates high accuracy in both seizure detection and classification tasks.
arXiv Detail & Related papers (2024-06-03T16:30:19Z) - Simulation-based Inference for Cardiovascular Models [43.55219268578912]
We use simulation-based inference to solve the inverse problem of mapping waveforms back to plausible physiological parameters.<n>We perform an in-silico uncertainty analysis of five biomarkers of clinical interest.<n>We study the gap between in-vivo and in-silico with the MIMIC-III waveform database.
arXiv Detail & Related papers (2023-07-26T02:34:57Z) - Individualized Dosing Dynamics via Neural Eigen Decomposition [51.62933814971523]
We introduce the Neural Eigen Differential Equation algorithm (NESDE)
NESDE provides individualized modeling, tunable generalization to new treatment policies, and fast, continuous, closed-form prediction.
We demonstrate the robustness of NESDE in both synthetic and real medical problems, and use the learned dynamics to publish simulated medical gym environments.
arXiv Detail & Related papers (2023-06-24T17:01:51Z) - Transient Hemodynamics Prediction Using an Efficient Octree-Based Deep
Learning Model [0.0]
We present an architecture that is tailored to predict high-resolution (spatial and temporal) velocity fields for complex synthetic vascular geometries.
Compared to CFD simulations, the velocity field can be estimated with a mean absolute error of 0.024 m/s, whereas the run time reduces from several hours on a high-performance cluster to a few seconds on a consumer graphical processing unit.
arXiv Detail & Related papers (2023-02-13T17:56:00Z) - Physics-informed neural networks for improving cerebral hemodynamics
predictions [0.0]
In this work, we put forth a physics-informed deep learning framework that augments sparse clinical measurements with fast computational fluid dynamics simulations.
Our framework employs in-vivo real-time TCD velocity measurements at several locations in the brain and the baseline vessel cross-sectional areas acquired from 3D images.
We validated the predictions of our model against in-vivo velocity measurements obtained via 4D MRI scans.
arXiv Detail & Related papers (2021-08-25T22:19:41Z) - Microvascular Dynamics from 4D Microscopy Using Temporal Segmentation [81.30750944868142]
We are able to track changes in cerebral blood volume over time and identify spontaneous arterial dilations that propagate towards the pial surface.
This new imaging capability is a promising step towards characterizing the hemodynamic response function upon which functional magnetic resonance imaging (fMRI) is based.
arXiv Detail & Related papers (2020-01-14T22:55:03Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.