COVID-19 growth prediction using multivariate long short term memory
- URL: http://arxiv.org/abs/2005.04809v2
- Date: Wed, 27 May 2020 04:07:36 GMT
- Title: COVID-19 growth prediction using multivariate long short term memory
- Authors: Novanto Yudistira
- Abstract summary: We use long short-term memory (LSTM) method to learn the correlation of COVID-19 growth over time.
First, we trained training data containing confirmed cases from around the globe.
We achieved favorable performance compared with that of the recurrent neural network (RNN) method with a comparable low validation error.
- Score: 2.588973722689844
- License: http://creativecommons.org/licenses/by-sa/4.0/
- Abstract: Coronavirus disease (COVID-19) spread forecasting is an important task to
track the growth of the pandemic. Existing predictions are merely based on
qualitative analyses and mathematical modeling. The use of available big data
with machine learning is still limited in COVID-19 growth prediction even
though the availability of data is abundance. To make use of big data in the
prediction using deep learning, we use long short-term memory (LSTM) method to
learn the correlation of COVID-19 growth over time. The structure of an LSTM
layer is searched heuristically until the best validation score is achieved.
First, we trained training data containing confirmed cases from around the
globe. We achieved favorable performance compared with that of the recurrent
neural network (RNN) method with a comparable low validation error. The
evaluation is conducted based on graph visualization and root mean squared
error (RMSE). We found that it is not easy to achieve the same quantity of
confirmed cases over time. However, LSTM provide a similar pattern between the
actual cases and prediction. In the future, our proposed prediction can be used
for anticipating forthcoming pandemics. The code is provided here:
https://github.com/cbasemaster/lstmcorona
Related papers
- TokenUnify: Scalable Autoregressive Visual Pre-training with Mixture Token Prediction [61.295716741720284]
TokenUnify is a novel pretraining method that integrates random token prediction, next-token prediction, and next-all token prediction.
Cooperated with TokenUnify, we have assembled a large-scale electron microscopy (EM) image dataset with ultra-high resolution.
This dataset includes over 120 million annotated voxels, making it the largest neuron segmentation dataset to date.
arXiv Detail & Related papers (2024-05-27T05:45:51Z) - Continuous time recurrent neural networks: overview and application to
forecasting blood glucose in the intensive care unit [56.801856519460465]
Continuous time autoregressive recurrent neural networks (CTRNNs) are a deep learning model that account for irregular observations.
We demonstrate the application of these models to probabilistic forecasting of blood glucose in a critical care setting.
arXiv Detail & Related papers (2023-04-14T09:39:06Z) - A spatiotemporal machine learning approach to forecasting COVID-19
incidence at the county level in the United States [2.9822184411723645]
We present COVID-LSTM, a data-driven model based on a Long Short-term memory architecture for forecasting COVID-19 incidence at the county-level in the US.
We use the weekly number of new cases as temporal input, and hand-engineered spatial features from Facebook to capture the spread of the disease in time and space.
Over the 4-week forecast horizon, our model is on average 50 cases per county more accurate than the COVIDhub-ensemble.
arXiv Detail & Related papers (2021-09-24T17:40:08Z) - Imputation-Free Learning from Incomplete Observations [73.15386629370111]
We introduce the importance of guided gradient descent (IGSGD) method to train inference from inputs containing missing values without imputation.
We employ reinforcement learning (RL) to adjust the gradients used to train the models via back-propagation.
Our imputation-free predictions outperform the traditional two-step imputation-based predictions using state-of-the-art imputation methods.
arXiv Detail & Related papers (2021-07-05T12:44:39Z) - Process Outcome Prediction: CNN vs. LSTM (with Attention) [0.15229257192293202]
We study the performance of Convolutional Neural Networks (CNN) and Long Short-Term Memory (LSTM) on time series problems.
Our findings show that all these neural networks achieve satisfactory to high predictive power.
We argue that CNNs' speed, early predictive power and robustness should pave the way for their application in process outcome prediction.
arXiv Detail & Related papers (2021-04-14T15:38:32Z) - STELAR: Spatio-temporal Tensor Factorization with Latent Epidemiological
Regularization [76.57716281104938]
We develop a tensor method to predict the evolution of epidemic trends for many regions simultaneously.
STELAR enables long-term prediction by incorporating latent temporal regularization through a system of discrete-time difference equations.
We conduct experiments using both county- and state-level COVID-19 data and show that our model can identify interesting latent patterns of the epidemic.
arXiv Detail & Related papers (2020-12-08T21:21:47Z) - condLSTM-Q: A novel deep learning model for predicting Covid-19
mortality in fine geographical Scale [0.0]
CondLSTM-Q is a model for making quantile predictions on COVID-19 death tolls at the county level with a two-week forecast window.
This fine geographical scale is a rare but useful feature in publicly available predictive models.
arXiv Detail & Related papers (2020-11-23T16:14:48Z) - Curse of Small Sample Size in Forecasting of the Active Cases in
COVID-19 Outbreak [0.0]
During the COVID-19 pandemic, a massive number of attempts on the predictions of the number of cases and the other future trends of this pandemic have been made.
However, they fail to predict, in a reliable way, the medium and long term evolution of fundamental features of COVID-19 outbreak within acceptable accuracy.
This paper gives an explanation for the failure of machine learning models in this particular forecasting problem.
arXiv Detail & Related papers (2020-11-06T23:13:34Z) - DeepRite: Deep Recurrent Inverse TreatmEnt Weighting for Adjusting
Time-varying Confounding in Modern Longitudinal Observational Data [68.29870617697532]
We propose Deep Recurrent Inverse TreatmEnt weighting (DeepRite) for time-varying confounding in longitudinal data.
DeepRite is shown to recover the ground truth from synthetic data, and estimate unbiased treatment effects from real data.
arXiv Detail & Related papers (2020-10-28T15:05:08Z) - A Deep Learning Framework for COVID Outbreak Prediction [4.922572106422333]
We propose a comparative analysis of deep learning models to forecast the COVID-19 outbreak.
We propose a new Attention-based encoder-decoder model, named Attention-Long Short Term Memory (AttentionLSTM)
The proposed model give superior forecasting accuracy compared to other existing methods.
arXiv Detail & Related papers (2020-09-30T12:48:38Z) - Short Term Blood Glucose Prediction based on Continuous Glucose
Monitoring Data [53.01543207478818]
This study explores the use of Continuous Glucose Monitoring (CGM) data as input for digital decision support tools.
We investigate how Recurrent Neural Networks (RNNs) can be used for Short Term Blood Glucose (STBG) prediction.
arXiv Detail & Related papers (2020-02-06T16:39:44Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.