Simulating time to event prediction with spatiotemporal echocardiography
deep learning
- URL: http://arxiv.org/abs/2103.02583v1
- Date: Wed, 3 Mar 2021 18:28:33 GMT
- Title: Simulating time to event prediction with spatiotemporal echocardiography
deep learning
- Authors: Rohan Shad, Nicolas Quach, Robyn Fong, Patpilai Kasinpila, Cayley
Bowles, Kate M. Callon, Michelle C. Li, Jeffrey Teuteberg, John P.
Cunningham, Curtis P. Langlotz, William Hiesinger
- Abstract summary: New methods for time-to-event prediction have been developed by extending the cox-proportional hazards model with neural networks.
We generate simulated survival datasets based on the expert annotated ejection fraction readings.
By training on just the simulated survival outcomes, we show thattemporal convolutional neural networks yield accurate survival estimates.
- Score: 12.059859769175281
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Integrating methods for time-to-event prediction with diagnostic imaging
modalities is of considerable interest, as accurate estimates of survival
requires accounting for censoring of individuals within the observation period.
New methods for time-to-event prediction have been developed by extending the
cox-proportional hazards model with neural networks. In this paper, to explore
the feasibility of these methods when applied to deep learning with
echocardiography videos, we utilize the Stanford EchoNet-Dynamic dataset with
over 10,000 echocardiograms, and generate simulated survival datasets based on
the expert annotated ejection fraction readings. By training on just the
simulated survival outcomes, we show that spatiotemporal convolutional neural
networks yield accurate survival estimates.
Related papers
- Deep State-Space Generative Model For Correlated Time-to-Event Predictions [54.3637600983898]
We propose a deep latent state-space generative model to capture the interactions among different types of correlated clinical events.
Our method also uncovers meaningful insights about the latent correlations among mortality and different types of organ failures.
arXiv Detail & Related papers (2024-07-28T02:42:36Z) - Advancing Head and Neck Cancer Survival Prediction via Multi-Label Learning and Deep Model Interpretation [7.698783025721071]
We propose IMLSP, an Interpretable Multi-Label multi-modal deep Survival Prediction framework for predicting multiple HNC survival outcomes simultaneously.
We also present Grad-TEAM, a Gradient-weighted Time-Event Activation Mapping approach specifically developed for deep survival model visual explanation.
arXiv Detail & Related papers (2024-05-09T01:30:04Z) - Value Prediction for Spatiotemporal Gait Data Using Deep Learning [0.19972837513980318]
We expand application of deep learning to value prediction of time-seriestemporal gait data.
Our results show that short-distance prediction has an RMSE as low as 0.060675, and long-distance prediction RMSE as low as 0.106365.
The proposed, customized models, used with value prediction open possibilities for additional applications, such as fall prediction, in-home progress monitoring, aiding of exoskeleton movement, and authentication.
arXiv Detail & Related papers (2024-02-29T18:30:13Z) - tdCoxSNN: Time-Dependent Cox Survival Neural Network for Continuous-time
Dynamic Prediction [19.38247205641199]
We propose a time-dependent Cox survival neural network (tdCoxSNN) to predict its progression using longitudinal fundus images.
We evaluate and compare our proposed method with joint modeling and landmarking approaches through extensive simulations.
arXiv Detail & Related papers (2023-07-12T03:03:40Z) - Continuous time recurrent neural networks: overview and application to
forecasting blood glucose in the intensive care unit [56.801856519460465]
Continuous time autoregressive recurrent neural networks (CTRNNs) are a deep learning model that account for irregular observations.
We demonstrate the application of these models to probabilistic forecasting of blood glucose in a critical care setting.
arXiv Detail & Related papers (2023-04-14T09:39:06Z) - DriPP: Driven Point Processes to Model Stimuli Induced Patterns in M/EEG
Signals [62.997667081978825]
We develop a novel statistical point process model-called driven temporal point processes (DriPP)
We derive a fast and principled expectation-maximization (EM) algorithm to estimate the parameters of this model.
Results on standard MEG datasets demonstrate that our methodology reveals event-related neural responses.
arXiv Detail & Related papers (2021-12-08T13:07:21Z) - Meta-Learning for Koopman Spectral Analysis with Short Time-series [49.41640137945938]
Existing methods require long time-series for training neural networks.
We propose a meta-learning method for estimating embedding functions from unseen short time-series.
We experimentally demonstrate that the proposed method achieves better performance in terms of eigenvalue estimation and future prediction.
arXiv Detail & Related papers (2021-02-09T07:19:19Z) - Weakly Supervised Arrhythmia Detection Based on Deep Convolutional
Neural Network [5.967433492643221]
Supervised deep learning has been widely used in the studies of automatic ECG classification.
Most of the existing large ECG datasets are roughly annotated, so the classification model trained on them can only detect the existence of abnormalities in a whole recording.
This study proposes weakly supervised deep learning models for detecting abnormal ECG events and their occurrence time.
arXiv Detail & Related papers (2020-12-10T12:59:33Z) - Patient-Specific Seizure Prediction Using Single Seizure
Electroencephalography Recording [16.395309518579914]
We propose a Siamese neural network based seizure prediction method that takes a wavelet transformed EEG tensor as an input with convolutional neural network (CNN) as the base network for detecting change-points in EEG.
Our method only needs one seizure for training which translates to less than ten minutes of preictal and interictal data while still getting comparable results to models which utilize multiple seizures for seizure prediction.
arXiv Detail & Related papers (2020-11-14T03:45:17Z) - Deep Modeling of Growth Trajectories for Longitudinal Prediction of
Missing Infant Cortical Surfaces [58.780482825156035]
We will introduce a method for longitudinal prediction of cortical surfaces using a spatial graph convolutional neural network (GCNN)
The proposed method is designed to model the cortical growth trajectories and jointly predict inner and outer curved surfaces at multiple time points.
We will demonstrate with experimental results that our method is capable of capturing the nonlinearity oftemporal cortical growth patterns.
arXiv Detail & Related papers (2020-09-06T18:46:04Z) - Prediction of the onset of cardiovascular diseases from electronic
health records using multi-task gated recurrent units [51.14334174570822]
We propose a multi-task recurrent neural network with attention mechanism for predicting cardiovascular events from electronic health records.
The proposed approach is compared to a standard clinical risk predictor (QRISK) and machine learning alternatives using 5-year data from a NHS Foundation Trust.
arXiv Detail & Related papers (2020-07-16T17:43:13Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.