Translating Clinical Delineation of Diabetic Foot Ulcers into Machine Interpretable Segmentation

• URL: http://arxiv.org/abs/2204.11618v1
• Date: Fri, 22 Apr 2022 09:54:35 GMT
• Title: Translating Clinical Delineation of Diabetic Foot Ulcers into Machine Interpretable Segmentation
• Abstract summary: In this paper, we propose a new diabetic foot ulcers dataset, namely DFUC2022. We assess whether the clinical delineations are machine interpretable by deep learning networks or if image processing refined contour should be used. This paper demonstrates that image processing using refined contour as ground truth can provide better agreement with machine predicted results.
• Score: 3.9903913600002507
• License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
• Abstract: Diabetic foot ulcer is a severe condition that requires close monitoring and management. For training machine learning methods to auto-delineate the ulcer, clinical staff must provide ground truth annotations. In this paper, we propose a new diabetic foot ulcers dataset, namely DFUC2022, the largest segmentation dataset where ulcer regions were manually delineated by clinicians. We assess whether the clinical delineations are machine interpretable by deep learning networks or if image processing refined contour should be used. By providing benchmark results using a selection of popular deep learning algorithms, we draw new insights into the limitations of DFU wound delineation and report on the associated issues. This paper provides some observations on baseline models to facilitate DFUC2022 Challenge in conjunction with MICCAI 2022. The leaderboard will be ranked by Dice score, where the best FCN-based method is 0.5708 and DeepLabv3+ achieved the best score of 0.6277. This paper demonstrates that image processing using refined contour as ground truth can provide better agreement with machine predicted results. DFUC2022 will be released on the 27th April 2022.

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