Edge Direction-invariant Graph Neural Networks for Molecular Dipole Moments Prediction

• URL: http://arxiv.org/abs/2206.12867v1
• Date: Sun, 26 Jun 2022 12:52:17 GMT
• Title: Edge Direction-invariant Graph Neural Networks for Molecular Dipole Moments Prediction
• Authors: Yang Jeong Park
• Abstract summary: We develop new embeddings for representation of the dipole moment in molecules. We show that the developed model works reasonably even for molecules with extended geometries. We significantly improve the prediction results with accuracy comparable to ab-initio calculations.
• Score: 0.0
• License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
• Abstract: The dipole moment is a physical quantity indicating the polarity of a molecule and is determined by reflecting the electrical properties of constituent atoms and the geometric properties of the molecule. Most embeddings used to represent graph representations in traditional graph neural network methodologies treat molecules as topological graphs, creating a significant barrier to the goal of recognizing geometric information. Unlike existing embeddings dealing with equivariance, which have been proposed to handle the 3D structure of molecules properly, our proposed embeddings directly express the physical implications of the local contribution of dipole moments. We show that the developed model works reasonably even for molecules with extended geometries and captures more interatomic interaction information, significantly improving the prediction results with accuracy comparable to ab-initio calculations.

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