Anomaly-aware multiple instance learning for rare anemia disorder
classification
- URL: http://arxiv.org/abs/2207.01742v1
- Date: Mon, 4 Jul 2022 22:56:09 GMT
- Title: Anomaly-aware multiple instance learning for rare anemia disorder
classification
- Abstract summary: Deep learning-based classification of rare anemia disorders is challenged by the lack of training data and instance-level annotations.
Multiple Instance Learning has shown to be an effective solution, yet it suffers from low accuracy and limited explainability.
We propose an interpretable pooling method for MIL to address these limitations.
- Score: 3.705427391718675
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Deep learning-based classification of rare anemia disorders is challenged by
the lack of training data and instance-level annotations. Multiple Instance
Learning (MIL) has shown to be an effective solution, yet it suffers from low
accuracy and limited explainability. Although the inclusion of attention
mechanisms has addressed these issues, their effectiveness highly depends on
the amount and diversity of cells in the training samples. Consequently, the
poor machine learning performance on rare anemia disorder classification from
blood samples remains unresolved. In this paper, we propose an interpretable
pooling method for MIL to address these limitations. By benefiting from
instance-level information of negative bags (i.e., homogeneous benign cells
from healthy individuals), our approach increases the contribution of anomalous
instances. We show that our strategy outperforms standard MIL classification
algorithms and provides a meaningful explanation behind its decisions.
Moreover, it can denote anomalous instances of rare blood diseases that are not
seen during the training phase.
Related papers
- Needle in a Haystack: One-Class Representation Learning for Detecting Rare Malignant Cells in Computational Cytology [2.3060860114058497]
Malignant cells are morphologically diverse yet vanishingly rare amid a vast background of normal cells.<n>One-class representation learning techniques can detect malignant cells in low-witness-rate scenarios.
arXiv Detail & Related papers (2026-04-09T02:13:29Z) - Every Error has Its Magnitude: Asymmetric Mistake Severity Training for Multiclass Multiple Instance Learning [7.643169473987673]
Multiple Instance Learning (MIL) has emerged as a promising paradigm for Whole Slide Image (WSI) diagnosis.<n>We propose a mistake-severity-aware training strategy that organizes diagnostic classes into a hierarchical structure.<n>We show that our approach significantly mitigates critical errors in MIL diagnosis compared to existing methods.
arXiv Detail & Related papers (2026-03-14T01:36:12Z) - Continual Multiple Instance Learning for Hematologic Disease Diagnosis [38.13262557169157]
We propose the first continual learning method tailored specifically to multiple instance learning (MIL)<n>Our method is rehearsal-based over a selection of single instances from various bags.<n>We show that our method considerably outperforms state-of-the-art methods, providing the first continual learning approach for MIL.
arXiv Detail & Related papers (2025-08-06T12:03:25Z) - Attention Is Not What You Need: Revisiting Multi-Instance Learning for Whole Slide Image Classification [51.95824566163554]
We argue that synergizing the standard MIL assumption with variational inference encourages the model to focus on tumour morphology instead of spurious correlations.
Our method also achieves better classification boundaries for identifying hard instances and mitigates the effect of spurious correlations between bags and labels.
arXiv Detail & Related papers (2024-08-18T12:15:22Z) - MMIL: A novel algorithm for disease associated cell type discovery [58.044870442206914]
Single-cell datasets often lack individual cell labels, making it challenging to identify cells associated with disease.
We introduce Mixture Modeling for Multiple Learning Instance (MMIL), an expectation method that enables the training and calibration of cell-level classifiers.
arXiv Detail & Related papers (2024-06-12T15:22:56Z) - Self-Supervised Multiple Instance Learning for Acute Myeloid Leukemia Classification [1.1874560263468232]
Diseases like Acute Myeloid Leukemia (AML) pose challenges due to scarce and costly annotations on a single-cell level.
Multiple Instance Learning (MIL) addresses weakly labeled scenarios but necessitates powerful encoders typically trained with labeled data.
In this study, we explore Self-Supervised Learning (SSL) as a pre-training approach for MIL-based subtype AML classification from blood smears.
arXiv Detail & Related papers (2024-03-08T15:16:15Z) - SC-MIL: Supervised Contrastive Multiple Instance Learning for Imbalanced
Classification in Pathology [2.854576370929018]
Machine learning problems in medical imaging often deal with rare diseases.
In pathology images, there is another level of imbalance, where given a positively labeled Whole Slide Image (WSI), only a fraction of pixels within it contribute to the positive label.
We propose a joint-training MIL framework in the presence of label imbalance that progressively transitions from learning bag-level representations to optimal classifier learning.
arXiv Detail & Related papers (2023-03-23T16:28:15Z) - Attend Who is Weak: Pruning-assisted Medical Image Localization under
Sophisticated and Implicit Imbalances [102.68466217374655]
Deep neural networks (DNNs) have rapidly become a textitde facto choice for medical image understanding tasks.
In this paper, we propose to use pruning to automatically and adaptively identify textithard-to-learn (HTL) training samples.
We also present an interesting demographic analysis which illustrates HTLs ability to capture complex demographic imbalances.
arXiv Detail & Related papers (2022-12-06T00:32:03Z) - Detecting Shortcut Learning for Fair Medical AI using Shortcut Testing [62.9062883851246]
Machine learning holds great promise for improving healthcare, but it is critical to ensure that its use will not propagate or amplify health disparities.
One potential driver of algorithmic unfairness, shortcut learning, arises when ML models base predictions on improper correlations in the training data.
Using multi-task learning, we propose the first method to assess and mitigate shortcut learning as a part of the fairness assessment of clinical ML systems.
arXiv Detail & Related papers (2022-07-21T09:35:38Z) - Unsupervised Representation Learning Meets Pseudo-Label Supervised
Self-Distillation: A New Approach to Rare Disease Classification [26.864435224276964]
We propose a novel hybrid approach to rare disease classification, featuring two key novelties.
First, we adopt the unsupervised representation learning (URL) based on self-supervising contrastive loss.
Second, we integrate the URL with pseudo-label supervised classification for effective self-distillation of the knowledge about the rare diseases.
arXiv Detail & Related papers (2021-10-09T12:56:09Z) - Label Cleaning Multiple Instance Learning: Refining Coarse Annotations
on Single Whole-Slide Images [83.7047542725469]
Annotating cancerous regions in whole-slide images (WSIs) of pathology samples plays a critical role in clinical diagnosis, biomedical research, and machine learning algorithms development.
We present a method, named Label Cleaning Multiple Instance Learning (LC-MIL), to refine coarse annotations on a single WSI without the need of external training data.
Our experiments on a heterogeneous WSI set with breast cancer lymph node metastasis, liver cancer, and colorectal cancer samples show that LC-MIL significantly refines the coarse annotations, outperforming the state-of-the-art alternatives, even while learning from a single slide.
arXiv Detail & Related papers (2021-09-22T15:06:06Z) - Unsupervised Embedding Learning from Uncertainty Momentum Modeling [37.674449317054716]
We propose a novel solution to explicitly model and explore the uncertainty of the given unlabeled learning samples.
We leverage such uncertainty modeling momentum to the learning which is helpful to tackle the outliers.
arXiv Detail & Related papers (2021-07-19T14:06:19Z) - Relational Subsets Knowledge Distillation for Long-tailed Retinal
Diseases Recognition [65.77962788209103]
We propose class subset learning by dividing the long-tailed data into multiple class subsets according to prior knowledge.
It enforces the model to focus on learning the subset-specific knowledge.
The proposed framework proved to be effective for the long-tailed retinal diseases recognition task.
arXiv Detail & Related papers (2021-04-22T13:39:33Z) - Variational Disentanglement for Rare Event Modeling [21.269897066024306]
We propose a variational disentanglement approach to learn from rare events in heavily imbalanced classification problems.
Specifically, we leverage the imposed extreme-distribution behavior on a latent space to extract information from low-prevalence events.
arXiv Detail & Related papers (2020-09-17T21:35:36Z) - M2m: Imbalanced Classification via Major-to-minor Translation [79.09018382489506]
In most real-world scenarios, labeled training datasets are highly class-imbalanced, where deep neural networks suffer from generalizing to a balanced testing criterion.
In this paper, we explore a novel yet simple way to alleviate this issue by augmenting less-frequent classes via translating samples from more-frequent classes.
Our experimental results on a variety of class-imbalanced datasets show that the proposed method improves the generalization on minority classes significantly compared to other existing re-sampling or re-weighting methods.
arXiv Detail & Related papers (2020-04-01T13:21:17Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.