Inferring latent neural sources via deep transcoding of simultaneously
acquired EEG and fMRI
- URL: http://arxiv.org/abs/2212.02226v1
- Date: Sun, 27 Nov 2022 23:44:16 GMT
- Title: Inferring latent neural sources via deep transcoding of simultaneously
acquired EEG and fMRI
- Authors: Xueqing Liu, Tao Tu, Paul Sajda
- Abstract summary: Simultaneous EEG-fMRI is a neuroimaging technique that provides complementary spatial and temporal resolution.
We develop a symmetric method consisting of a cyclic convolutional transcoder that transcodes EEG to fMRI.
We quantify, for both the simulated and real EEG-fMRI data, how well the modalities can be transcoded from one to another.
- Score: 12.588880677192975
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Simultaneous EEG-fMRI is a multi-modal neuroimaging technique that provides
complementary spatial and temporal resolution. Challenging has been developing
principled and interpretable approaches for fusing the modalities, specifically
approaches enabling inference of latent source spaces representative of neural
activity. In this paper, we address this inference problem within the framework
of transcoding -- mapping from a specific encoding (modality) to a decoding
(the latent source space) and then encoding the latent source space to the
other modality. Specifically, we develop a symmetric method consisting of a
cyclic convolutional transcoder that transcodes EEG to fMRI and vice versa.
Without any prior knowledge of either the hemodynamic response function or lead
field matrix, the complete data-driven method exploits the temporal and spatial
relationships between the modalities and latent source spaces to learn these
mappings. We quantify, for both the simulated and real EEG-fMRI data, how well
the modalities can be transcoded from one to another as well as the source
spaces that are recovered, all evaluated on unseen data. In addition to
enabling a new way to symmetrically infer a latent source space, the method can
also be seen as low-cost computational neuroimaging -- i.e. generating an
'expensive' fMRI BOLD image from 'low cost' EEG data.
Related papers
- MindFormer: Semantic Alignment of Multi-Subject fMRI for Brain Decoding [50.55024115943266]
We introduce a novel semantic alignment method of multi-subject fMRI signals using so-called MindFormer.
This model is specifically designed to generate fMRI-conditioned feature vectors that can be used for conditioning Stable Diffusion model for fMRI- to-image generation or large language model (LLM) for fMRI-to-text generation.
Our experimental results demonstrate that MindFormer generates semantically consistent images and text across different subjects.
arXiv Detail & Related papers (2024-05-28T00:36:25Z) - Disentangled Multimodal Brain MR Image Translation via Transformer-based
Modality Infuser [12.402947207350394]
We propose a transformer-based modality infuser designed to synthesize multimodal brain MR images.
In our method, we extract modality-agnostic features from the encoder and then transform them into modality-specific features.
We carried out experiments on the BraTS 2018 dataset, translating between four MR modalities.
arXiv Detail & Related papers (2024-02-01T06:34:35Z) - A Compact Implicit Neural Representation for Efficient Storage of
Massive 4D Functional Magnetic Resonance Imaging [14.493622422645053]
fMRI compressing poses unique challenges due to its intricate temporal dynamics, low signal-to-noise ratio, and complicated underlying redundancies.
This paper reports a novel compression paradigm specifically tailored for fMRI data based on Implicit Neural Representation (INR)
arXiv Detail & Related papers (2023-11-30T05:54:37Z) - fMRI-PTE: A Large-scale fMRI Pretrained Transformer Encoder for
Multi-Subject Brain Activity Decoding [54.17776744076334]
We propose fMRI-PTE, an innovative auto-encoder approach for fMRI pre-training.
Our approach involves transforming fMRI signals into unified 2D representations, ensuring consistency in dimensions and preserving brain activity patterns.
Our contributions encompass introducing fMRI-PTE, innovative data transformation, efficient training, a novel learning strategy, and the universal applicability of our approach.
arXiv Detail & Related papers (2023-11-01T07:24:22Z) - Joint fMRI Decoding and Encoding with Latent Embedding Alignment [77.66508125297754]
We introduce a unified framework that addresses both fMRI decoding and encoding.
Our model concurrently recovers visual stimuli from fMRI signals and predicts brain activity from images within a unified framework.
arXiv Detail & Related papers (2023-03-26T14:14:58Z) - Unsupervised Domain Transfer with Conditional Invertible Neural Networks [83.90291882730925]
We propose a domain transfer approach based on conditional invertible neural networks (cINNs)
Our method inherently guarantees cycle consistency through its invertible architecture, and network training can efficiently be conducted with maximum likelihood.
Our method enables the generation of realistic spectral data and outperforms the state of the art on two downstream classification tasks.
arXiv Detail & Related papers (2023-03-17T18:00:27Z) - fMRI from EEG is only Deep Learning away: the use of interpretable DL to
unravel EEG-fMRI relationships [68.8204255655161]
We present an interpretable domain grounded solution to recover the activity of several subcortical regions from multichannel EEG data.
We recover individual spatial and time-frequency patterns of scalp EEG predictive of the hemodynamic signal in the subcortical nuclei.
arXiv Detail & Related papers (2022-10-23T15:11:37Z) - Complex-valued Federated Learning with Differential Privacy and MRI Applications [51.34714485616763]
We introduce the complex-valued Gaussian mechanism, whose behaviour we characterise in terms of $f$-DP, $(varepsilon, delta)$-DP and R'enyi-DP.
We present novel complex-valued neural network primitives compatible with DP.
Experimentally, we showcase a proof-of-concept by training federated complex-valued neural networks with DP on a real-world task.
arXiv Detail & Related papers (2021-10-07T14:03:00Z) - Latent neural source recovery via transcoding of simultaneous EEG-fMRI [6.450549412132897]
Simultaneous EEG-fMRI provides spatial and temporal resolution for inferring a latent source space of neural activity.
We develop a symmetric method consisting of a cyclic convolutional transcoder that transcodes EEG to fMRI and vice versa.
We show, for real EEG-fMRI data, how well the modalities can be transcoded from one to another as well as the source spaces that are recovered.
arXiv Detail & Related papers (2020-10-05T17:17:29Z) - Augmenting interictal mapping with neurovascular coupling biomarkers by
structured factorization of epileptic EEG and fMRI data [3.2268407474728957]
We develop a novel structured matrix-tensor factorization for EEG-fMRI analysis.
We show that the extracted source signatures provide a sensitive localization of the ictal onset zone.
We also show that complementary localizing information can be derived from the spatial variation of the hemodynamic response.
arXiv Detail & Related papers (2020-04-29T13:27:45Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.