Multi-site, Multi-domain Airway Tree Modeling (ATM'22): A Public
Benchmark for Pulmonary Airway Segmentation
- URL: http://arxiv.org/abs/2303.05745v3
- Date: Tue, 27 Jun 2023 06:36:42 GMT
- Title: Multi-site, Multi-domain Airway Tree Modeling (ATM'22): A Public
Benchmark for Pulmonary Airway Segmentation
- Authors: Minghui Zhang, Yangqian Wu, Hanxiao Zhang, Yulei Qin, Hao Zheng, Wen
Tang, Corey Arnold, Chenhao Pei, Pengxin Yu, Yang Nan, Guang Yang, Simon
Walsh, Dominic C. Marshall, Matthieu Komorowski, Puyang Wang, Dazhou Guo,
Dakai Jin, Ya'nan Wu, Shuiqing Zhao, Runsheng Chang, Boyu Zhang, Xing Lv,
Abdul Qayyum, Moona Mazher, Qi Su, Yonghuang Wu, Ying'ao Liu, Yufei Zhu,
Jiancheng Yang, Ashkan Pakzad, Bojidar Rangelov, Raul San Jose Estepar,
Carlos Cano Espinosa, Jiayuan Sun, Guang-Zhong Yang, Yun Gu
- Abstract summary: Open international challenges are becoming the de facto standard for assessing computer vision and image analysis algorithms.
To provide a benchmark for the medical imaging community, we organized the Multi-site, Multi-domain Airway Tree Modeling (ATM'22)
ATM'22 provides large-scale CT scans with detailed pulmonary airway annotation, including 500 CT scans (300 for training, 50 for validation, and 150 for testing)
Twenty-three teams participated in the entire phase of the challenge and the algorithms for the top ten teams are reviewed in this paper.
- Score: 36.07818905920447
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Open international challenges are becoming the de facto standard for
assessing computer vision and image analysis algorithms. In recent years, new
methods have extended the reach of pulmonary airway segmentation that is closer
to the limit of image resolution. Since EXACT'09 pulmonary airway segmentation,
limited effort has been directed to quantitative comparison of newly emerged
algorithms driven by the maturity of deep learning based approaches and
clinical drive for resolving finer details of distal airways for early
intervention of pulmonary diseases. Thus far, public annotated datasets are
extremely limited, hindering the development of data-driven methods and
detailed performance evaluation of new algorithms. To provide a benchmark for
the medical imaging community, we organized the Multi-site, Multi-domain Airway
Tree Modeling (ATM'22), which was held as an official challenge event during
the MICCAI 2022 conference. ATM'22 provides large-scale CT scans with detailed
pulmonary airway annotation, including 500 CT scans (300 for training, 50 for
validation, and 150 for testing). The dataset was collected from different
sites and it further included a portion of noisy COVID-19 CTs with ground-glass
opacity and consolidation. Twenty-three teams participated in the entire phase
of the challenge and the algorithms for the top ten teams are reviewed in this
paper. Quantitative and qualitative results revealed that deep learning models
embedded with the topological continuity enhancement achieved superior
performance in general. ATM'22 challenge holds as an open-call design, the
training data and the gold standard evaluation are available upon successful
registration via its homepage.
Related papers
- LNQ 2023 challenge: Benchmark of weakly-supervised techniques for mediastinal lymph node quantification [20.587781330491122]
The Mediastinal Lymph Node Quantification (LNQ) challenge was organized in conjunction with the 26th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2023)
This challenge aimed to advance weakly-supervised segmentation methods by providing a new, partially annotated dataset and a robust evaluation framework.
The results highlighted both the potential and the current limitations of weakly-supervised approaches.
arXiv Detail & Related papers (2024-08-19T15:11:01Z) - RadGenome-Chest CT: A Grounded Vision-Language Dataset for Chest CT Analysis [56.57177181778517]
RadGenome-Chest CT is a large-scale, region-guided 3D chest CT interpretation dataset based on CT-RATE.
We leverage the latest powerful universal segmentation and large language models to extend the original datasets.
arXiv Detail & Related papers (2024-04-25T17:11:37Z) - Deep Rib Fracture Instance Segmentation and Classification from CT on
the RibFrac Challenge [66.86170104167608]
The RibFrac Challenge provides a benchmark dataset of over 5,000 rib fractures from 660 CT scans.
During the MICCAI 2020 challenge period, 243 results were evaluated, and seven teams were invited to participate in the challenge summary.
The analysis revealed that several top rib fracture detection solutions achieved performance comparable or even better than human experts.
arXiv Detail & Related papers (2024-02-14T18:18:33Z) - Hunting imaging biomarkers in pulmonary fibrosis: Benchmarks of the AIIB23 challenge [29.973814271192744]
The 'Airway-Informed Quantitative CT Imaging Biomarker for Fibrotic Lung Disease 2023' competition was organized in conjunction with the official 2023 International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
A training set of 120 high-resolution computerised tomography (HRCT) scans were publicly released with expert annotations and mortality status.
The online validation set incorporated 52 HRCT scans from patients with fibrotic lung disease and the offline test set included 140 cases from fibrosis and COVID-19 patients.
The results have shown that the capacity of extracting airway trees from patients with fibrotic lung disease could be
arXiv Detail & Related papers (2023-12-21T11:33:10Z) - AeroPath: An airway segmentation benchmark dataset with challenging
pathology [0.0]
We introduce a new public benchmark dataset (AeroPath) consisting of 27 CT images from patients with pathologies ranging from emphysema to large tumors.
We present a multiscale fusion design for automatic airway segmentation. Models were trained on the ATM'22 dataset, tested on the AeroPath dataset, and further evaluated against competitive open-source methods.
The results demonstrated that our proposed architecture predicted topologically correct segmentations for all the patients included in the AeroPath dataset.
arXiv Detail & Related papers (2023-11-02T10:41:42Z) - Accurate Airway Tree Segmentation in CT Scans via Anatomy-aware
Multi-class Segmentation and Topology-guided Iterative Learning [15.492349389589121]
Intrathoracic airway segmentation in computed tomography (CT) is a prerequisite for various respiratory disease analyses.
Most of the existing airway datasets are incompletely labeled/annotated.
We propose a new anatomy-aware multi-class airway segmentation method enhanced by topology-guided iterative self-learning.
arXiv Detail & Related papers (2023-06-15T13:23:05Z) - Boundary Guided Semantic Learning for Real-time COVID-19 Lung Infection
Segmentation System [69.40329819373954]
The coronavirus disease 2019 (COVID-19) continues to have a negative impact on healthcare systems around the world.
At the current stage, automatically segmenting the lung infection area from CT images is essential for the diagnosis and treatment of COVID-19.
We propose a boundary guided semantic learning network (BSNet) in this paper.
arXiv Detail & Related papers (2022-09-07T05:01:38Z) - Lung-Originated Tumor Segmentation from Computed Tomography Scan (LOTUS)
Benchmark [48.30502612686276]
Lung cancer is one of the deadliest cancers, and its effective diagnosis and treatment depend on the accurate delineation of the tumor.
Human-centered segmentation, which is currently the most common approach, is subject to inter-observer variability.
The 2018 VIP Cup started with a global engagement from 42 countries to access the competition data.
In a nutshell, all the algorithms proposed during the competition, are based on deep learning models combined with a false positive reduction technique.
arXiv Detail & Related papers (2022-01-03T03:06:38Z) - CT Image Segmentation for Inflamed and Fibrotic Lungs Using a
Multi-Resolution Convolutional Neural Network [6.177921466996229]
The purpose of this study was to develop a fully-automated segmentation algorithm, robust to various density enhancing lung abnormalities.
A polymorphic training approach is proposed, in which both specifically labeled left and right lungs of humans with COPD, and nonspecifically labeled lungs of animals with acute lung injury, were incorporated into training a single neural network.
The resulting network is intended for predicting left and right lung regions in humans with or without diffuse opacification and consolidation.
arXiv Detail & Related papers (2020-10-16T18:25:59Z) - AGE Challenge: Angle Closure Glaucoma Evaluation in Anterior Segment
Optical Coherence Tomography [61.405005501608706]
Angle closure glaucoma (ACG) is a more aggressive disease than open-angle glaucoma.
Anterior Segment Optical Coherence Tomography (AS- OCT) imaging provides a fast and contactless way to discriminate angle closure from open angle.
There is no public AS- OCT dataset available for evaluating the existing methods in a uniform way.
We organized the Angle closure Glaucoma Evaluation challenge (AGE), held in conjunction with MICCAI 2019.
arXiv Detail & Related papers (2020-05-05T14:55:01Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.