Curriculum-Based Augmented Fourier Domain Adaptation for Robust Medical
Image Segmentation
- URL: http://arxiv.org/abs/2306.03511v1
- Date: Tue, 6 Jun 2023 08:56:58 GMT
- Title: Curriculum-Based Augmented Fourier Domain Adaptation for Robust Medical
Image Segmentation
- Authors: An Wang, Mobarakol Islam, Mengya Xu, Hongliang Ren
- Abstract summary: This work proposes the Curriculum-based Augmented Fourier Domain Adaptation (Curri-AFDA) for robust medical image segmentation.
In particular, our curriculum learning strategy is based on the causal relationship of a model under different levels of data shift.
Experiments on two segmentation tasks of Retina and Nuclei collected from multiple sites and scanners suggest that our proposed method yields superior adaptation and generalization performance.
- Score: 18.830738606514736
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Accurate and robust medical image segmentation is fundamental and crucial for
enhancing the autonomy of computer-aided diagnosis and intervention systems.
Medical data collection normally involves different scanners, protocols, and
populations, making domain adaptation (DA) a highly demanding research field to
alleviate model degradation in the deployment site. To preserve the model
performance across multiple testing domains, this work proposes the
Curriculum-based Augmented Fourier Domain Adaptation (Curri-AFDA) for robust
medical image segmentation. In particular, our curriculum learning strategy is
based on the causal relationship of a model under different levels of data
shift in the deployment phase, where the higher the shift is, the harder to
recognize the variance. Considering this, we progressively introduce more
amplitude information from the target domain to the source domain in the
frequency space during the curriculum-style training to smoothly schedule the
semantic knowledge transfer in an easier-to-harder manner. Besides, we
incorporate the training-time chained augmentation mixing to help expand the
data distributions while preserving the domain-invariant semantics, which is
beneficial for the acquired model to be more robust and generalize better to
unseen domains. Extensive experiments on two segmentation tasks of Retina and
Nuclei collected from multiple sites and scanners suggest that our proposed
method yields superior adaptation and generalization performance. Meanwhile,
our approach proves to be more robust under various corruption types and
increasing severity levels. In addition, we show our method is also beneficial
in the domain-adaptive classification task with skin lesion datasets. The code
is available at https://github.com/lofrienger/Curri-AFDA.
Related papers
- Domain Generalization with Adversarial Intensity Attack for Medical
Image Segmentation [27.49427483473792]
In real-world scenarios, it is common for models to encounter data from new and different domains to which they were not exposed to during training.
domain generalization (DG) is a promising direction as it enables models to handle data from previously unseen domains.
We introduce a novel DG method called Adversarial Intensity Attack (AdverIN), which leverages adversarial training to generate training data with an infinite number of styles.
arXiv Detail & Related papers (2023-04-05T19:40:51Z) - Learning to Augment via Implicit Differentiation for Domain
Generalization [107.9666735637355]
Domain generalization (DG) aims to overcome the problem by leveraging multiple source domains to learn a domain-generalizable model.
In this paper, we propose a novel augmentation-based DG approach, dubbed AugLearn.
AugLearn shows effectiveness on three standard DG benchmarks, PACS, Office-Home and Digits-DG.
arXiv Detail & Related papers (2022-10-25T18:51:51Z) - AADG: Automatic Augmentation for Domain Generalization on Retinal Image
Segmentation [1.0452185327816181]
We propose a data manipulation based domain generalization method, called Automated Augmentation for Domain Generalization (AADG)
Our AADG framework can effectively sample data augmentation policies that generate novel domains.
Our proposed AADG exhibits state-of-the-art generalization performance and outperforms existing approaches.
arXiv Detail & Related papers (2022-07-27T02:26:01Z) - Single-domain Generalization in Medical Image Segmentation via Test-time
Adaptation from Shape Dictionary [64.5632303184502]
Domain generalization typically requires data from multiple source domains for model learning.
This paper studies the important yet challenging single domain generalization problem, in which a model is learned under the worst-case scenario with only one source domain to directly generalize to different unseen target domains.
We present a novel approach to address this problem in medical image segmentation, which extracts and integrates the semantic shape prior information of segmentation that are invariant across domains.
arXiv Detail & Related papers (2022-06-29T08:46:27Z) - Unsupervised Domain Adaptation Using Feature Disentanglement And GCNs
For Medical Image Classification [5.6512908295414]
We propose an unsupervised domain adaptation approach that uses graph neural networks and, disentangled semantic and domain invariant structural features.
We test the proposed method for classification on two challenging medical image datasets with distribution shifts.
Experiments show our method achieves state-of-the-art results compared to other domain adaptation methods.
arXiv Detail & Related papers (2022-06-27T09:02:16Z) - Domain Generalization on Medical Imaging Classification using Episodic
Training with Task Augmentation [62.49837463676111]
We propose a novel scheme of episodic training with task augmentation on medical imaging classification.
Motivated by the limited number of source domains in real-world medical deployment, we consider the unique task-level overfitting.
arXiv Detail & Related papers (2021-06-13T03:56:59Z) - Cross-Modality Brain Tumor Segmentation via Bidirectional
Global-to-Local Unsupervised Domain Adaptation [61.01704175938995]
In this paper, we propose a novel Bidirectional Global-to-Local (BiGL) adaptation framework under a UDA scheme.
Specifically, a bidirectional image synthesis and segmentation module is proposed to segment the brain tumor.
The proposed method outperforms several state-of-the-art unsupervised domain adaptation methods by a large margin.
arXiv Detail & Related papers (2021-05-17T10:11:45Z) - Embracing the Disharmony in Heterogeneous Medical Data [12.739380441313022]
Heterogeneity in medical imaging data is often tackled, in the context of machine learning, using domain invariance.
This paper instead embraces the heterogeneity and treats it as a multi-task learning problem.
We show that this approach improves classification accuracy by 5-30 % across different datasets on the main classification tasks.
arXiv Detail & Related papers (2021-03-23T21:36:39Z) - Disentangled Representations for Domain-generalized Cardiac Segmentation [19.108784219423377]
"Resolution Augmentation" method generates more diverse data by rescaling images to different resolutions within a range spanning different scanner protocols.
"Factor-based Augmentation" method generates more diverse data by projecting the original samples onto disentangled latent spaces.
Our experiments demonstrate the importance of efficient adaptation between seen and unseen domains, as well as model generalization ability.
arXiv Detail & Related papers (2020-08-26T12:20:09Z) - Shape-aware Meta-learning for Generalizing Prostate MRI Segmentation to
Unseen Domains [68.73614619875814]
We present a novel shape-aware meta-learning scheme to improve the model generalization in prostate MRI segmentation.
Experimental results show that our approach outperforms many state-of-the-art generalization methods consistently across all six settings of unseen domains.
arXiv Detail & Related papers (2020-07-04T07:56:02Z) - MS-Net: Multi-Site Network for Improving Prostate Segmentation with
Heterogeneous MRI Data [75.73881040581767]
We propose a novel multi-site network (MS-Net) for improving prostate segmentation by learning robust representations.
Our MS-Net improves the performance across all datasets consistently, and outperforms state-of-the-art methods for multi-site learning.
arXiv Detail & Related papers (2020-02-09T14:11:50Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.