M-VAAL: Multimodal Variational Adversarial Active Learning for
Downstream Medical Image Analysis Tasks
- URL: http://arxiv.org/abs/2306.12376v1
- Date: Wed, 21 Jun 2023 16:40:37 GMT
- Title: M-VAAL: Multimodal Variational Adversarial Active Learning for
Downstream Medical Image Analysis Tasks
- Authors: Bidur Khanal, Binod Bhattarai, Bishesh Khanal, Danail Stoyanov,
Cristian A. Linte
- Abstract summary: Active learning attempts to minimize the need for large annotated samples by actively sampling the most informative examples for annotation.
We propose a Multimodal Variational Adversarial Active Learning (M-VAAL) method that uses auxiliary information from additional modalities to enhance the active sampling.
- Score: 16.85572580186212
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Acquiring properly annotated data is expensive in the medical field as it
requires experts, time-consuming protocols, and rigorous validation. Active
learning attempts to minimize the need for large annotated samples by actively
sampling the most informative examples for annotation. These examples
contribute significantly to improving the performance of supervised machine
learning models, and thus, active learning can play an essential role in
selecting the most appropriate information in deep learning-based diagnosis,
clinical assessments, and treatment planning. Although some existing works have
proposed methods for sampling the best examples for annotation in medical image
analysis, they are not task-agnostic and do not use multimodal auxiliary
information in the sampler, which has the potential to increase robustness.
Therefore, in this work, we propose a Multimodal Variational Adversarial Active
Learning (M-VAAL) method that uses auxiliary information from additional
modalities to enhance the active sampling. We applied our method to two
datasets: i) brain tumor segmentation and multi-label classification using the
BraTS2018 dataset, and ii) chest X-ray image classification using the
COVID-QU-Ex dataset. Our results show a promising direction toward
data-efficient learning under limited annotations.
Related papers
- DALSA: Domain Adaptation for Supervised Learning From Sparsely Annotated
MR Images [2.352695945685781]
We propose a new method that employs transfer learning techniques to correct sampling selection errors introduced by sparse annotations during supervised learning for automated tumor segmentation.
The proposed method derives high-quality classifiers for the different tissue classes from sparse and unambiguous annotations.
Compared to training on fully labeled data, we reduced the time for labeling and training by a factor greater than 70 and 180 respectively without sacrificing accuracy.
arXiv Detail & Related papers (2024-03-12T09:17:21Z) - Temporal Output Discrepancy for Loss Estimation-based Active Learning [65.93767110342502]
We present a novel deep active learning approach that queries the oracle for data annotation when the unlabeled sample is believed to incorporate high loss.
Our approach achieves superior performances than the state-of-the-art active learning methods on image classification and semantic segmentation tasks.
arXiv Detail & Related papers (2022-12-20T19:29:37Z) - ALLSH: Active Learning Guided by Local Sensitivity and Hardness [98.61023158378407]
We propose to retrieve unlabeled samples with a local sensitivity and hardness-aware acquisition function.
Our method achieves consistent gains over the commonly used active learning strategies in various classification tasks.
arXiv Detail & Related papers (2022-05-10T15:39:11Z) - Interpretability-Driven Sample Selection Using Self Supervised Learning
For Disease Classification And Segmentation [4.898744396854313]
We propose a novel sample selection methodology based on deep features leveraging information contained in interpretability saliency maps.
We show our proposed self supervised approach outperforms other approaches in selecting informative samples leading to state of the art performance with fewer samples.
arXiv Detail & Related papers (2021-04-13T10:46:33Z) - Active learning for medical code assignment [55.99831806138029]
We demonstrate the effectiveness of Active Learning (AL) in multi-label text classification in the clinical domain.
We apply a set of well-known AL methods to help automatically assign ICD-9 codes on the MIMIC-III dataset.
Our results show that the selection of informative instances provides satisfactory classification with a significantly reduced training set.
arXiv Detail & Related papers (2021-04-12T18:11:17Z) - Active Selection of Classification Features [0.0]
Auxiliary data, such as demographics, might help in selecting a smaller sample that comprises the individuals with the most informative MRI scans.
We propose two utility-based approaches for this problem, and evaluate their performance on three public real-world benchmark datasets.
arXiv Detail & Related papers (2021-02-26T18:19:08Z) - DSAL: Deeply Supervised Active Learning from Strong and Weak Labelers
for Biomedical Image Segmentation [13.707848142719424]
We propose a deep active semi-supervised learning framework, DSAL, combining active learning and semi-supervised learning strategies.
In DSAL, a new criterion based on deep supervision mechanism is proposed to select informative samples with high uncertainties.
We use the proposed criteria to select samples for strong and weak labelers to produce oracle labels and pseudo labels simultaneously at each active learning iteration.
arXiv Detail & Related papers (2021-01-22T11:31:33Z) - Diminishing Uncertainty within the Training Pool: Active Learning for
Medical Image Segmentation [6.3858225352615285]
We explore active learning for the task of segmentation of medical imaging data sets.
We propose three new strategies for active learning: increasing frequency of uncertain data to bias the training data set, using mutual information among the input images as a regularizer and adaptation of Dice log-likelihood for Stein variational gradient descent (SVGD)
The results indicate an improvement in terms of data reduction by achieving full accuracy while only using 22.69 % and 48.85 % of the available data for each dataset, respectively.
arXiv Detail & Related papers (2021-01-07T01:55:48Z) - Select-ProtoNet: Learning to Select for Few-Shot Disease Subtype
Prediction [55.94378672172967]
We focus on few-shot disease subtype prediction problem, identifying subgroups of similar patients.
We introduce meta learning techniques to develop a new model, which can extract the common experience or knowledge from interrelated clinical tasks.
Our new model is built upon a carefully designed meta-learner, called Prototypical Network, that is a simple yet effective meta learning machine for few-shot image classification.
arXiv Detail & Related papers (2020-09-02T02:50:30Z) - Self-Training with Improved Regularization for Sample-Efficient Chest
X-Ray Classification [80.00316465793702]
We present a deep learning framework that enables robust modeling in challenging scenarios.
Our results show that using 85% lesser labeled data, we can build predictive models that match the performance of classifiers trained in a large-scale data setting.
arXiv Detail & Related papers (2020-05-03T02:36:00Z) - Confident Coreset for Active Learning in Medical Image Analysis [57.436224561482966]
We propose a novel active learning method, confident coreset, which considers both uncertainty and distribution for effectively selecting informative samples.
By comparative experiments on two medical image analysis tasks, we show that our method outperforms other active learning methods.
arXiv Detail & Related papers (2020-04-05T13:46:16Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.