Nano1D: An accurate Computer Vision software for analysis and
segmentation of low-dimensional nanostructures
- URL: http://arxiv.org/abs/2306.15319v3
- Date: Sun, 10 Dec 2023 19:46:02 GMT
- Title: Nano1D: An accurate Computer Vision software for analysis and
segmentation of low-dimensional nanostructures
- Authors: Ehsan Moradpur-Tari (1), Sergei Vlassov (1,2), Sven Oras (1,2), Mart
Ernits (1), Elyad Damerchi (1), Boris Polyakovc (3), Andreas Kyritsakis (1),
and Veronika Zadin (1) ((1) Institute of Technology, University of Tartu,
Nooruse 1, 50411 Tartu, Estonia (2) Institute of Physics, University of
Tartu, W. Ostwaldi 1, 50411 Tartu, Estonia (3) Institute of Solid State
Physics, University of Latvia, Kengaraga street 8, LV-1063 Riga, Latvia)
- Abstract summary: The model, named Nano1D, has four steps of preprocessing, segmentation, separating overlapped objects and geometrical measurements.
It successfully segments and analyzes their geometrical characteristics including lengths and average diameter.
The main strength of the model is shown to be its ability to segment and analyze overlapping objects successfully with more than 99% accuracy.
- Score: 0.0
- License: http://creativecommons.org/licenses/by-nc-nd/4.0/
- Abstract: Nanoparticles in microscopy images are usually analyzed qualitatively or
manually and there is a need for autonomous quantitative analysis of these
objects. In this paper, we present a physics-based computational model for
accurate segmentation and geometrical analysis of one-dimensional deformable
overlapping objects from microscopy images. This model, named Nano1D, has four
steps of preprocessing, segmentation, separating overlapped objects and
geometrical measurements. The model is tested on SEM images of Ag and Au
nanowire taken from different microscopes, and thermally fragmented Ag
nanowires transformed into nanoparticles with different lengths, diameters, and
population densities. It successfully segments and analyzes their geometrical
characteristics including lengths and average diameter. The function of the
algorithm is not undermined by the size, number, density, orientation and
overlapping of objects in images. The main strength of the model is shown to be
its ability to segment and analyze overlapping objects successfully with more
than 99% accuracy, while current machine learning and computational models
suffer from inaccuracy and inability to segment overlapping objects. Benefiting
from a graphical user interface, Nano1D can analyze 1D nanoparticles including
nanowires, nanotubes, nanorods in addition to other 1D features of
microstructures like microcracks, dislocations etc.
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