Development and validation of an interpretable machine learning-based
calculator for predicting 5-year weight trajectories after bariatric surgery:
a multinational retrospective cohort SOPHIA study
- URL: http://arxiv.org/abs/2308.16585v1
- Date: Thu, 31 Aug 2023 09:30:06 GMT
- Title: Development and validation of an interpretable machine learning-based
calculator for predicting 5-year weight trajectories after bariatric surgery:
a multinational retrospective cohort SOPHIA study
- Authors: Patrick Saux (Scool, CRIStAL), Pierre Bauvin, Violeta Raverdy, Julien
Teigny (Scool), H\'el\`ene Verkindt, Tomy Soumphonphakdy (Scool), Maxence
Debert (Scool), Anne Jacobs, Daan Jacobs, Valerie Monpellier, Phong Ching
Lee, Chin Hong Lim, Johanna C Andersson-Assarsson, Lena Carlsson, Per-Arne
Svensson, Florence Galtier, Guelareh Dezfoulian, Mihaela Moldovanu, Severine
Andrieux, Julien Couster, Marie Lepage, Erminia Lembo, Ornella Verrastro,
Maud Robert, Paulina Salminen, Geltrude Mingrone, Ralph Peterli, Ricardo V
Cohen, Carlos Zerrweck, David Nocca, Carel W Le Roux, Robert Caiazzo,
Philippe Preux (Scool, CRIStAL), Fran\c{c}ois Pattou
- Abstract summary: We developed a model using machine learning to provide individual preoperative prediction of 5-year weight loss trajectories after surgery.
Model is incorporated in an easy to use and interpretable web-based prediction tool to help inform clinical decision before surgery.
- Score: 0.19676506937647395
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Background Weight loss trajectories after bariatric surgery vary widely
between individuals, and predicting weight loss before the operation remains
challenging. We aimed to develop a model using machine learning to provide
individual preoperative prediction of 5-year weight loss trajectories after
surgery. Methods In this multinational retrospective observational study we
enrolled adult participants (aged $\ge$18 years) from ten prospective cohorts
(including ABOS [NCT01129297], BAREVAL [NCT02310178], the Swedish Obese
Subjects study, and a large cohort from the Dutch Obesity Clinic [Nederlandse
Obesitas Kliniek]) and two randomised trials (SleevePass [NCT00793143] and
SM-BOSS [NCT00356213]) in Europe, the Americas, and Asia, with a 5 year
followup after Roux-en-Y gastric bypass, sleeve gastrectomy, or gastric band.
Patients with a previous history of bariatric surgery or large delays between
scheduled and actual visits were excluded. The training cohort comprised
patients from two centres in France (ABOS and BAREVAL). The primary outcome was
BMI at 5 years. A model was developed using least absolute shrinkage and
selection operator to select variables and the classification and regression
trees algorithm to build interpretable regression trees. The performances of
the model were assessed through the median absolute deviation (MAD) and root
mean squared error (RMSE) of BMI. Findings10 231 patients from 12 centres in
ten countries were included in the analysis, corresponding to 30 602
patient-years. Among participants in all 12 cohorts, 7701 (75$\bullet$3%) were
female, 2530 (24$\bullet$7%) were male. Among 434 baseline attributes available
in the training cohort, seven variables were selected: height, weight,
intervention type, age, diabetes status, diabetes duration, and smoking status.
At 5 years, across external testing cohorts the overall mean MAD BMI was
2$\bullet$8 kg/m${}^2$ (95% CI 2$\bullet$6-3$\bullet$0) and mean RMSE BMI was
4$\bullet$7 kg/m${}^2$ (4$\bullet$4-5$\bullet$0), and the mean difference
between predicted and observed BMI was-0$\bullet$3 kg/m${}^2$ (SD 4$\bullet$7).
This model is incorporated in an easy to use and interpretable web-based
prediction tool to help inform clinical decision before surgery.
InterpretationWe developed a machine learning-based model, which is
internationally validated, for predicting individual 5-year weight loss
trajectories after three common bariatric interventions.
Related papers
- Brain Tumor Classification on MRI in Light of Molecular Markers [61.77272414423481]
Co-deletion of the 1p/19q gene is associated with clinical outcomes in low-grade gliomas.
This study aims to utilize a specially MRI-based convolutional neural network for brain cancer detection.
arXiv Detail & Related papers (2024-09-29T07:04:26Z) - BMI Prediction from Handwritten English Characters Using a Convolutional Neural Network [0.0]
No previous research established a clear connection between deep learning techniques for handwriting analysis and BMI prediction.
This article addresses this research gap with a deep learning approach to estimating BMI from handwritten characters by developing a convolutional neural network (CNN)
A dataset containing samples from 48 people in lowercase English scripts is successfully captured for the BMI prediction task.
arXiv Detail & Related papers (2024-09-04T10:06:42Z) - Using Pre-training and Interaction Modeling for ancestry-specific disease prediction in UK Biobank [69.90493129893112]
Recent genome-wide association studies (GWAS) have uncovered the genetic basis of complex traits, but show an under-representation of non-European descent individuals.
Here, we assess whether we can improve disease prediction across diverse ancestries using multiomic data.
arXiv Detail & Related papers (2024-04-26T16:39:50Z) - PatchBMI-Net: Lightweight Facial Patch-based Ensemble for BMI Prediction [3.9440964696313485]
Self-diagnostic facial image-based BMI prediction methods are proposed for healthy weight monitoring.
These methods have mostly used convolutional neural network (CNN) based regression baselines, such as VGG19, ResNet50, and Efficient-NetB0.
This paper aims to develop a lightweight facial patch-based ensemble (PatchBMI-Net) for BMI prediction to facilitate the deployment and weight monitoring using smartphones.
arXiv Detail & Related papers (2023-11-29T21:39:24Z) - Small-scale proxies for large-scale Transformer training instabilities [69.36381318171338]
We seek ways to reproduce and study training stability and instability at smaller scales.
By measuring the relationship between learning rate and loss across scales, we show that these instabilities also appear in small models when training at high learning rates.
We study methods such as warm-up, weight decay, and the $mu$Param to train small models that achieve similar losses across orders of magnitude of learning rate variation.
arXiv Detail & Related papers (2023-09-25T17:48:51Z) - Body Fat Estimation from Surface Meshes using Graph Neural Networks [48.85291874087541]
We show that triangulated body surface meshes can be used to accurately predict VAT and ASAT volumes using graph neural networks.
Our methods achieve high performance while reducing training time and required resources compared to state-of-the-art convolutional neural networks in this area.
arXiv Detail & Related papers (2023-07-13T10:21:34Z) - Machine Learning and Bioinformatics for Diagnosis Analysis of Obesity
Spectrum Disorders [0.0]
The number of obese patients has doubled due to sedentary lifestyles and improper dieting.
Life expectancy dropped from 80 to 75 years, as obese people struggle with different chronic diseases.
This report will address the problems of obesity in children and adults using ML datasets to feature, predict, and analyze the causes of obesity.
arXiv Detail & Related papers (2022-08-05T13:07:27Z) - Dynamic Bank Learning for Semi-supervised Federated Image Diagnosis with
Class Imbalance [65.61909544178603]
We study a practical yet challenging problem of class imbalanced semi-supervised FL (imFed-Semi)
This imFed-Semi problem is addressed by a novel dynamic bank learning scheme, which improves client training by exploiting class proportion information.
We evaluate our approach on two public real-world medical datasets, including the intracranial hemorrhage diagnosis with 25,000 CT slices and skin lesion diagnosis with 10,015 dermoscopy images.
arXiv Detail & Related papers (2022-06-27T06:51:48Z) - Who will Leave a Pediatric Weight Management Program and When? -- A
machine learning approach for predicting attrition patterns [1.0705399532413615]
Multidisciplinary pediatric weight management programs are considered standard treatment for children with obesity and severe obesity.
High drop-out rates (referred to as attrition) are a major hurdle in delivering successful interventions.
We present a machine learning model to predict (a) the likelihood of attrition, and (b) the change in body-mass index (BMI) percentile of children, at different time points after joining a weight management program.
arXiv Detail & Related papers (2022-02-03T18:41:36Z) - Brain Age Estimation From MRI Using Cascade Networks with Ranking Loss [75.03117866578913]
A novel 3D convolutional network, called two-stage-age-network (TSAN), is proposed to estimate brain age from T1-weighted MRI data.
Experiments with $6586$ MRIs showed that TSAN could provide accurate brain age estimation.
arXiv Detail & Related papers (2021-06-06T07:11:25Z) - Deep Learning to Quantify Pulmonary Edema in Chest Radiographs [7.121765928263759]
We developed a machine learning model to classify the severity grades of pulmonary edema on chest radiographs.
Deep learning models were trained on a large chest radiograph dataset.
arXiv Detail & Related papers (2020-08-13T15:45:44Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.