Explainable concept mappings of MRI: Revealing the mechanisms underlying deep learning-based brain disease classification
- URL: http://arxiv.org/abs/2404.10433v1
- Date: Tue, 16 Apr 2024 09:56:08 GMT
- Title: Explainable concept mappings of MRI: Revealing the mechanisms underlying deep learning-based brain disease classification
- Authors: Christian Tinauer, Anna Damulina, Maximilian Sackl, Martin Soellradl, Reduan Achtibat, Maximilian Dreyer, Frederik Pahde, Sebastian Lapuschkin, Reinhold Schmidt, Stefan Ropele, Wojciech Samek, Christian Langkammer,
- Abstract summary: Recent studies show high accuracy in the classification of Alzheimer's disease using deep neural networks.
To identify changes in brain regions through concepts learned by the deep neural network for model validation.
- Score: 9.637454568121425
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Motivation. While recent studies show high accuracy in the classification of Alzheimer's disease using deep neural networks, the underlying learned concepts have not been investigated. Goals. To systematically identify changes in brain regions through concepts learned by the deep neural network for model validation. Approach. Using quantitative R2* maps we separated Alzheimer's patients (n=117) from normal controls (n=219) by using a convolutional neural network and systematically investigated the learned concepts using Concept Relevance Propagation and compared these results to a conventional region of interest-based analysis. Results. In line with established histological findings and the region of interest-based analyses, highly relevant concepts were primarily found in and adjacent to the basal ganglia. Impact. The identification of concepts learned by deep neural networks for disease classification enables validation of the models and could potentially improve reliability.
Related papers
- Discovering Chunks in Neural Embeddings for Interpretability [53.80157905839065]
We propose leveraging the principle of chunking to interpret artificial neural population activities.
We first demonstrate this concept in recurrent neural networks (RNNs) trained on artificial sequences with imposed regularities.
We identify similar recurring embedding states corresponding to concepts in the input, with perturbations to these states activating or inhibiting the associated concepts.
arXiv Detail & Related papers (2025-02-03T20:30:46Z) - Explainable Brain Age Gap Prediction in Neurodegenerative Conditions using coVariance Neural Networks [94.06526659234756]
Black-box machine learning approaches to brain age gap prediction have limited practical utility.<n>We apply the VNN-based approach to study brain age gap using cortical thickness features for various prevalent neurodegenerative conditions.<n>Our results reveal distinct anatomic patterns for brain age gap in Alzheimer's disease, frontotemporal dementia, and atypical Parkinsonian disorders.
arXiv Detail & Related papers (2025-01-02T19:37:09Z) - Adapting the Biological SSVEP Response to Artificial Neural Networks [5.4712259563296755]
This paper introduces a novel approach to neuron significance assessment inspired by frequency tagging, a technique from neuroscience.
Experiments conducted with a convolutional neural network for image classification reveal notable harmonics and intermodulations in neuron-specific responses under part-based frequency tagging.
The proposed method holds promise for applications in network pruning, and model interpretability, contributing to the advancement of explainable artificial intelligence.
arXiv Detail & Related papers (2024-11-15T10:02:48Z) - Probing Biological and Artificial Neural Networks with Task-dependent
Neural Manifolds [12.037840490243603]
We investigate the internal mechanisms of neural networks through the lens of neural population geometry.
We quantitatively characterize how different learning objectives lead to differences in the organizational strategies of these models.
These analyses present a strong direction for bridging mechanistic and normative theories in neural networks through neural population geometry.
arXiv Detail & Related papers (2023-12-21T20:40:51Z) - Brain-Inspired Machine Intelligence: A Survey of
Neurobiologically-Plausible Credit Assignment [65.268245109828]
We examine algorithms for conducting credit assignment in artificial neural networks that are inspired or motivated by neurobiology.
We organize the ever-growing set of brain-inspired learning schemes into six general families and consider these in the context of backpropagation of errors.
The results of this review are meant to encourage future developments in neuro-mimetic systems and their constituent learning processes.
arXiv Detail & Related papers (2023-12-01T05:20:57Z) - NeuroExplainer: Fine-Grained Attention Decoding to Uncover Cortical
Development Patterns of Preterm Infants [73.85768093666582]
We propose an explainable geometric deep network dubbed NeuroExplainer.
NeuroExplainer is used to uncover altered infant cortical development patterns associated with preterm birth.
arXiv Detail & Related papers (2023-01-01T12:48:12Z) - Functional2Structural: Cross-Modality Brain Networks Representation
Learning [55.24969686433101]
Graph mining on brain networks may facilitate the discovery of novel biomarkers for clinical phenotypes and neurodegenerative diseases.
We propose a novel graph learning framework, known as Deep Signed Brain Networks (DSBN), with a signed graph encoder.
We validate our framework on clinical phenotype and neurodegenerative disease prediction tasks using two independent, publicly available datasets.
arXiv Detail & Related papers (2022-05-06T03:45:36Z) - Data-driven emergence of convolutional structure in neural networks [83.4920717252233]
We show how fully-connected neural networks solving a discrimination task can learn a convolutional structure directly from their inputs.
By carefully designing data models, we show that the emergence of this pattern is triggered by the non-Gaussian, higher-order local structure of the inputs.
arXiv Detail & Related papers (2022-02-01T17:11:13Z) - Ensembling complex network 'perspectives' for mild cognitive impairment
detection with artificial neural networks [5.194561180498554]
We propose a novel method for mild cognitive impairment detection based on jointly exploiting the complex network and the neural network paradigm.
In particular, the method is based on ensembling different brain structural "perspectives" with artificial neural networks.
arXiv Detail & Related papers (2021-01-26T08:38:11Z) - Neuro-symbolic Neurodegenerative Disease Modeling as Probabilistic
Programmed Deep Kernels [93.58854458951431]
We present a probabilistic programmed deep kernel learning approach to personalized, predictive modeling of neurodegenerative diseases.
Our analysis considers a spectrum of neural and symbolic machine learning approaches.
We run evaluations on the problem of Alzheimer's disease prediction, yielding results that surpass deep learning.
arXiv Detail & Related papers (2020-09-16T15:16:03Z) - Interpretation of Brain Morphology in Association to Alzheimer's Disease
Dementia Classification Using Graph Convolutional Networks on Triangulated
Meshes [6.088308871328403]
We propose a mesh-based technique to aid in the classification of Alzheimer's disease dementia (ADD) using mesh representations of the cortex and subcortical structures.
We outperform other machine learning methods with a 96.35% testing accuracy for the ADD vs. healthy control problem.
arXiv Detail & Related papers (2020-08-14T01:10:39Z) - A Graph Gaussian Embedding Method for Predicting Alzheimer's Disease
Progression with MEG Brain Networks [59.15734147867412]
Characterizing the subtle changes of functional brain networks associated with Alzheimer's disease (AD) is important for early diagnosis and prediction of disease progression.
We developed a new deep learning method, termed multiple graph Gaussian embedding model (MG2G)
We used MG2G to detect the intrinsic latent dimensionality of MEG brain networks, predict the progression of patients with mild cognitive impairment (MCI) to AD, and identify brain regions with network alterations related to MCI.
arXiv Detail & Related papers (2020-05-08T02:29:24Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.