I2I-Mamba: Multi-modal medical image synthesis via selective state space modeling
- URL: http://arxiv.org/abs/2405.14022v4
- Date: Fri, 15 Nov 2024 10:35:58 GMT
- Title: I2I-Mamba: Multi-modal medical image synthesis via selective state space modeling
- Authors: Omer F. Atli, Bilal Kabas, Fuat Arslan, Arda C. Demirtas, Mahmut Yurt, Onat Dalmaz, Tolga Çukur,
- Abstract summary: We propose a novel adversarial model for medical image synthesis, I2I-Mamba, to efficiently capture long-range context.
I2I-Mamba offers superior performance against state-of-the-art CNN- and transformer-based methods in synthesizing target-modality images.
- Score: 8.48392350084504
- License:
- Abstract: In recent years, deep learning models comprising transformer components have pushed the performance envelope in medical image synthesis tasks. Contrary to convolutional neural networks (CNNs) that use static, local filters, transformers use self-attention mechanisms to permit adaptive, non-local filtering to sensitively capture long-range context. However, this sensitivity comes at the expense of substantial model complexity, which can compromise learning efficacy particularly on relatively modest-sized imaging datasets. Here, we propose a novel adversarial model for multi-modal medical image synthesis, I2I-Mamba, that leverages selective state space modeling (SSM) to efficiently capture long-range context while maintaining local precision. To do this, I2I-Mamba injects channel-mixed Mamba (cmMamba) blocks in the bottleneck of a convolutional backbone. In cmMamba blocks, SSM layers are used to learn context across the spatial dimension and channel-mixing layers are used to learn context across the channel dimension of feature maps. Comprehensive demonstrations are reported for imputing missing images in multi-contrast MRI and MRI-CT protocols. Our results indicate that I2I-Mamba offers superior performance against state-of-the-art CNN- and transformer-based methods in synthesizing target-modality images.
Related papers
- A Unified Model for Compressed Sensing MRI Across Undersampling Patterns [69.19631302047569]
Deep neural networks have shown great potential for reconstructing high-fidelity images from undersampled measurements.
Our model is based on neural operators, a discretization-agnostic architecture.
Our inference speed is also 1,400x faster than diffusion methods.
arXiv Detail & Related papers (2024-10-05T20:03:57Z) - MambaClinix: Hierarchical Gated Convolution and Mamba-Based U-Net for Enhanced 3D Medical Image Segmentation [6.673169053236727]
We propose MambaClinix, a novel U-shaped architecture for medical image segmentation.
MambaClinix integrates a hierarchical gated convolutional network with Mamba in an adaptive stage-wise framework.
Our results show that MambaClinix achieves high segmentation accuracy while maintaining low model complexity.
arXiv Detail & Related papers (2024-09-19T07:51:14Z) - Prototype Learning Guided Hybrid Network for Breast Tumor Segmentation in DCE-MRI [58.809276442508256]
We propose a hybrid network via the combination of convolution neural network (CNN) and transformer layers.
The experimental results on private and public DCE-MRI datasets demonstrate that the proposed hybrid network superior performance than the state-of-the-art methods.
arXiv Detail & Related papers (2024-08-11T15:46:00Z) - NeuroPictor: Refining fMRI-to-Image Reconstruction via Multi-individual Pretraining and Multi-level Modulation [55.51412454263856]
This paper proposes to directly modulate the generation process of diffusion models using fMRI signals.
By training with about 67,000 fMRI-image pairs from various individuals, our model enjoys superior fMRI-to-image decoding capacity.
arXiv Detail & Related papers (2024-03-27T02:42:52Z) - MedMamba: Vision Mamba for Medical Image Classification [0.0]
Vision transformers (ViTs) and convolutional neural networks (CNNs) have been extensively studied and widely used in medical image classification tasks.
Recent studies have shown that state space models (SSMs) represented by Mamba can effectively model long-range dependencies.
We propose MedMamba, the first Vision Mamba for generalized medical image classification.
arXiv Detail & Related papers (2024-03-06T16:49:33Z) - nnMamba: 3D Biomedical Image Segmentation, Classification and Landmark
Detection with State Space Model [24.955052600683423]
In this paper, we introduce nnMamba, a novel architecture that integrates the strengths of CNNs and the advanced long-range modeling capabilities of State Space Sequence Models (SSMs)
Experiments on 6 datasets demonstrate nnMamba's superiority over state-of-the-art methods in a suite of challenging tasks, including 3D image segmentation, classification, and landmark detection.
arXiv Detail & Related papers (2024-02-05T21:28:47Z) - U-Mamba: Enhancing Long-range Dependency for Biomedical Image
Segmentation [10.083902382768406]
We introduce U-Mamba, a general-purpose network for biomedical image segmentation.
Inspired by the State Space Sequence Models (SSMs), a new family of deep sequence models, we design a hybrid CNN-SSM block.
We conduct experiments on four diverse tasks, including the 3D abdominal organ segmentation in CT and MR images, instrument segmentation in endoscopy images, and cell segmentation in microscopy images.
arXiv Detail & Related papers (2024-01-09T18:53:20Z) - Style transfer between Microscopy and Magnetic Resonance Imaging via
Generative Adversarial Network in small sample size settings [49.84018914962972]
Cross-modal augmentation of Magnetic Resonance Imaging (MRI) and microscopic imaging based on the same tissue samples is promising.
We tested a method for generating microscopic histological images from MRI scans of the corpus callosum using conditional generative adversarial network (cGAN) architecture.
arXiv Detail & Related papers (2023-10-16T13:58:53Z) - CSformer: Bridging Convolution and Transformer for Compressive Sensing [65.22377493627687]
This paper proposes a hybrid framework that integrates the advantages of leveraging detailed spatial information from CNN and the global context provided by transformer for enhanced representation learning.
The proposed approach is an end-to-end compressive image sensing method, composed of adaptive sampling and recovery.
The experimental results demonstrate the effectiveness of the dedicated transformer-based architecture for compressive sensing.
arXiv Detail & Related papers (2021-12-31T04:37:11Z) - ResViT: Residual vision transformers for multi-modal medical image
synthesis [0.0]
We propose a novel generative adversarial approach for medical image synthesis, ResViT, to combine local precision of convolution operators with contextual sensitivity of vision transformers.
Our results indicate the superiority of ResViT against competing methods in terms of qualitative observations and quantitative metrics.
arXiv Detail & Related papers (2021-06-30T12:57:37Z) - TransUNet: Transformers Make Strong Encoders for Medical Image
Segmentation [78.01570371790669]
Medical image segmentation is an essential prerequisite for developing healthcare systems.
On various medical image segmentation tasks, the u-shaped architecture, also known as U-Net, has become the de-facto standard.
We propose TransUNet, which merits both Transformers and U-Net, as a strong alternative for medical image segmentation.
arXiv Detail & Related papers (2021-02-08T16:10:50Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.