Mix-Domain Contrastive Learning for Unpaired H&E-to-IHC Stain Translation
- URL: http://arxiv.org/abs/2406.11799v2
- Date: Fri, 30 Aug 2024 20:10:51 GMT
- Title: Mix-Domain Contrastive Learning for Unpaired H&E-to-IHC Stain Translation
- Authors: Song Wang, Zhong Zhang, Huan Yan, Ming Xu, Guanghui Wang,
- Abstract summary: We propose a Mix-Domain Contrastive Learning method to leverage the supervision information in unpaired H&E-to-IHC stain translation.
With the mix-domain pathology information aggregation, MDCL enhances the pathological consistency between the corresponding patches and the component discrepancy of the patches from the different positions of the generated IHC image.
- Score: 14.719264181466766
- License: http://creativecommons.org/licenses/by-nc-nd/4.0/
- Abstract: H&E-to-IHC stain translation techniques offer a promising solution for precise cancer diagnosis, especially in low-resource regions where there is a shortage of health professionals and limited access to expensive equipment. Considering the pixel-level misalignment of H&E-IHC image pairs, current research explores the pathological consistency between patches from the same positions of the image pair. However, most of them overemphasize the correspondence between domains or patches, overlooking the side information provided by the non-corresponding objects. In this paper, we propose a Mix-Domain Contrastive Learning (MDCL) method to leverage the supervision information in unpaired H&E-to-IHC stain translation. Specifically, the proposed MDCL method aggregates the inter-domain and intra-domain pathology information by estimating the correlation between the anchor patch and all the patches from the matching images, encouraging the network to learn additional contrastive knowledge from mixed domains. With the mix-domain pathology information aggregation, MDCL enhances the pathological consistency between the corresponding patches and the component discrepancy of the patches from the different positions of the generated IHC image. Extensive experiments on two H&E-to-IHC stain translation datasets, namely MIST and BCI, demonstrate that the proposed method achieves state-of-the-art performance across multiple metrics.
Related papers
- Advancing H&E-to-IHC Stain Translation in Breast Cancer: A Multi-Magnification and Attention-Based Approach [13.88935300094334]
We propose a novel model integrating attention mechanisms and multi-magnification information processing.
Our model employs a multi-magnification processing strategy to extract and utilize information from various magnifications within pathology images.
Rigorous testing on a publicly available breast cancer dataset demonstrates superior performance compared to existing methods.
arXiv Detail & Related papers (2024-08-04T04:55:10Z) - Dual-scale Enhanced and Cross-generative Consistency Learning for Semi-supervised Medical Image Segmentation [49.57907601086494]
Medical image segmentation plays a crucial role in computer-aided diagnosis.
We propose a novel Dual-scale Enhanced and Cross-generative consistency learning framework for semi-supervised medical image (DEC-Seg)
arXiv Detail & Related papers (2023-12-26T12:56:31Z) - Improving Vision Anomaly Detection with the Guidance of Language
Modality [64.53005837237754]
This paper tackles the challenges for vision modality from a multimodal point of view.
We propose Cross-modal Guidance (CMG) to tackle the redundant information issue and sparse space issue.
To learn a more compact latent space for the vision anomaly detector, CMLE learns a correlation structure matrix from the language modality.
arXiv Detail & Related papers (2023-10-04T13:44:56Z) - AGMDT: Virtual Staining of Renal Histology Images with Adjacency-Guided
Multi-Domain Transfer [9.8359439975283]
We propose a novel virtual staining framework AGMDT to translate images into other domains by avoiding pixel-level alignment.
Based on it, the proposed framework AGMDT discovers patch-level aligned pairs across the serial slices of multi-domains through glomerulus detection and bipartite graph matching.
Experimental results show that the proposed AGMDT achieves a good balance between the precise pixel-level alignment and unpaired domain transfer.
arXiv Detail & Related papers (2023-09-12T17:37:56Z) - Improving Multiple Sclerosis Lesion Segmentation Across Clinical Sites:
A Federated Learning Approach with Noise-Resilient Training [75.40980802817349]
Deep learning models have shown promise for automatically segmenting MS lesions, but the scarcity of accurately annotated data hinders progress in this area.
We introduce a Decoupled Hard Label Correction (DHLC) strategy that considers the imbalanced distribution and fuzzy boundaries of MS lesions.
We also introduce a Centrally Enhanced Label Correction (CELC) strategy, which leverages the aggregated central model as a correction teacher for all sites.
arXiv Detail & Related papers (2023-08-31T00:36:10Z) - The Whole Pathological Slide Classification via Weakly Supervised
Learning [7.313528558452559]
We introduce two pathological priors: nuclear disease of cells and spatial correlation of pathological tiles.
We propose a data augmentation method that utilizes stain separation during extractor training.
We then describe the spatial relationships between the tiles using an adjacency matrix.
By integrating these two views, we designed a multi-instance framework for analyzing H&E-stained tissue images.
arXiv Detail & Related papers (2023-07-12T16:14:23Z) - Adaptive Supervised PatchNCE Loss for Learning H&E-to-IHC Stain
Translation with Inconsistent Groundtruth Image Pairs [5.841841666625825]
We present a new loss function, Adaptive Supervised PatchNCE (ASP), to deal with the input to target inconsistencies in a proposed H&E-to-IHC image-to-image translation framework.
In our experiment, we demonstrate that our proposed method outperforms existing image-to-image translation methods for stain translation to multiple IHC stains.
arXiv Detail & Related papers (2023-03-10T19:56:34Z) - Cross-level Contrastive Learning and Consistency Constraint for
Semi-supervised Medical Image Segmentation [46.678279106837294]
We propose a cross-level constrastive learning scheme to enhance representation capacity for local features in semi-supervised medical image segmentation.
With the help of the cross-level contrastive learning and consistency constraint, the unlabelled data can be effectively explored to improve segmentation performance.
arXiv Detail & Related papers (2022-02-08T15:12:11Z) - Margin Preserving Self-paced Contrastive Learning Towards Domain
Adaptation for Medical Image Segmentation [51.93711960601973]
We propose a novel margin preserving self-paced contrastive Learning model for cross-modal medical image segmentation.
With the guidance of progressively refined semantic prototypes, a novel margin preserving contrastive loss is proposed to boost the discriminability of embedded representation space.
Experiments on cross-modal cardiac segmentation tasks demonstrate that MPSCL significantly improves semantic segmentation performance.
arXiv Detail & Related papers (2021-03-15T15:23:10Z) - Detecting Pancreatic Ductal Adenocarcinoma in Multi-phase CT Scans via
Alignment Ensemble [77.5625174267105]
Pancreatic ductal adenocarcinoma (PDAC) is one of the most lethal cancers among the population.
Multiple phases provide more information than single phase, but they are unaligned and inhomogeneous in texture.
We suggest an ensemble of all these alignments as a promising way to boost the performance of PDAC detection.
arXiv Detail & Related papers (2020-03-18T19:06:27Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.