Weakly Supervised Spatial Implicit Neural Representation Learning for 3D MRI-Ultrasound Deformable Image Registration in HDR Prostate Brachytherapy
- URL: http://arxiv.org/abs/2503.14395v1
- Date: Tue, 18 Mar 2025 16:30:08 GMT
- Title: Weakly Supervised Spatial Implicit Neural Representation Learning for 3D MRI-Ultrasound Deformable Image Registration in HDR Prostate Brachytherapy
- Authors: Jing Wang, Ruirui Liu, Yu Lei, Michael J. Baine, Tian Liu, Yang Lei,
- Abstract summary: This study introduces a novel weakly supervised SINR-based approach for 3D MRI-US deformable registration.<n>It achieves accurate, robust, and computationally efficient registration, enhancing real-time image guidance in HDR prostate brachytherapy.
- Score: 5.457582385030137
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Purpose: Accurate 3D MRI-ultrasound (US) deformable registration is critical for real-time guidance in high-dose-rate (HDR) prostate brachytherapy. We present a weakly supervised spatial implicit neural representation (SINR) method to address modality differences and pelvic anatomy challenges. Methods: The framework uses sparse surface supervision from MRI/US segmentations instead of dense intensity matching. SINR models deformations as continuous spatial functions, with patient-specific surface priors guiding a stationary velocity field for biologically plausible deformations. Validation included 20 public Prostate-MRI-US-Biopsy cases and 10 institutional HDR cases, evaluated via Dice similarity coefficient (DSC), mean surface distance (MSD), and 95% Hausdorff distance (HD95). Results: The proposed method achieved robust registration. For the public dataset, prostate DSC was $0.93 \pm 0.05$, MSD $0.87 \pm 0.10$ mm, and HD95 $1.58 \pm 0.37$ mm. For the institutional dataset, prostate CTV achieved DSC $0.88 \pm 0.09$, MSD $1.21 \pm 0.38$ mm, and HD95 $2.09 \pm 1.48$ mm. Bladder and rectum performance was lower due to ultrasound's limited field of view. Visual assessments confirmed accurate alignment with minimal discrepancies. Conclusion: This study introduces a novel weakly supervised SINR-based approach for 3D MRI-US deformable registration. By leveraging sparse surface supervision and spatial priors, it achieves accurate, robust, and computationally efficient registration, enhancing real-time image guidance in HDR prostate brachytherapy and improving treatment precision.
Related papers
- Deep Regression 2D-3D Ultrasound Registration for Liver Motion Correction in Focal Tumor Thermal Ablation [5.585625844344932]
Liver tumor ablation procedures require accurate placement of the needle applicator at the tumor centroid.
Image registration techniques can aid in interpreting anatomical details and identifying tumors, but their clinical application has been hindered by the tradeoff between alignment accuracy and runtime performance.
We propose a 2D-3D US registration approach to enable intra-procedural alignment that mitigates errors caused by liver motion.
arXiv Detail & Related papers (2024-10-03T15:24:45Z) - Continuous sPatial-Temporal Deformable Image Registration (CPT-DIR) for motion modelling in radiotherapy: beyond classic voxel-based methods [10.17207334278678]
We propose an implicit neural representation (INR)-based approach modelling motion continuously in both space and time, named Continues-sPatial-Temporal DIR (CPT-DIR)
The DIR's performance was tested on the DIR-Lab dataset of 10 lung 4DCT cases, using metrics of landmark accuracy (TRE), contour conformity (Dice) and image similarity (MAE)
The proposed CPT-DIR can reduce landmark TRE from 2.79mm to 0.99mm, outperforming B-splines' results for all cases.
arXiv Detail & Related papers (2024-05-01T10:26:08Z) - On the Localization of Ultrasound Image Slices within Point Distribution
Models [84.27083443424408]
Thyroid disorders are most commonly diagnosed using high-resolution Ultrasound (US)
Longitudinal tracking is a pivotal diagnostic protocol for monitoring changes in pathological thyroid morphology.
We present a framework for automated US image slice localization within a 3D shape representation.
arXiv Detail & Related papers (2023-09-01T10:10:46Z) - Weakly supervised segmentation of intracranial aneurysms using a novel 3D focal modulation UNet [0.5106162890866905]
We propose FocalSegNet, a novel 3D focal modulation UNet, to detect an aneurysm and offer an initial, coarse segmentation of it from time-of-flight MRA image patches.
We trained and evaluated our model on a public dataset, and in terms of UIA detection, our model showed a low false-positive rate of 0.21 and a high sensitivity of 0.80.
arXiv Detail & Related papers (2023-08-06T03:28:08Z) - Diffusion Models for Counterfactual Generation and Anomaly Detection in Brain Images [39.94162291765236]
We present a weakly supervised method to generate a healthy version of a diseased image and then use it to obtain a pixel-wise anomaly map.
We employ a diffusion model trained on healthy samples and combine Denoising Diffusion Probabilistic Model (DDPM) and Denoising Implicit Model (DDIM) at each step of the sampling process.
arXiv Detail & Related papers (2023-08-03T21:56:50Z) - Thoracic Cartilage Ultrasound-CT Registration using Dense Skeleton Graph [49.11220791279602]
It is challenging to accurately map planned paths from a generic atlas to individual patients, particularly for thoracic applications.
A graph-based non-rigid registration is proposed to enable transferring planned paths from the atlas to the current setup.
arXiv Detail & Related papers (2023-07-07T18:57:21Z) - Domain Transfer Through Image-to-Image Translation for Uncertainty-Aware Prostate Cancer Classification [42.75911994044675]
We present a novel approach for unpaired image-to-image translation of prostate MRIs and an uncertainty-aware training approach for classifying clinically significant PCa.
Our approach involves a novel pipeline for translating unpaired 3.0T multi-parametric prostate MRIs to 1.5T, thereby augmenting the available training data.
Our experiments demonstrate that the proposed method significantly improves the Area Under ROC Curve (AUC) by over 20% compared to the previous work.
arXiv Detail & Related papers (2023-07-02T05:26:54Z) - RRWaveNet: A Compact End-to-End Multi-Scale Residual CNN for Robust PPG
Respiratory Rate Estimation [0.6464087844700315]
Respiratory rate (RR) is an important biomarker as RR changes can reflect severe medical events such as heart disease, lung disease, and sleep disorders.
Standard RR counting is prone to human error and cannot be performed continuously.
This study proposes a method for continuously estimating RR, RRWaveNet.
arXiv Detail & Related papers (2022-08-18T07:11:34Z) - Localizing the Recurrent Laryngeal Nerve via Ultrasound with a Bayesian
Shape Framework [65.19784967388934]
Tumor infiltration of the recurrent laryngeal nerve (RLN) is a contraindication for robotic thyroidectomy and can be difficult to detect via standard laryngoscopy.
We propose a knowledge-driven framework for RLN localization, mimicking the standard approach surgeons take to identify the RLN according to its surrounding organs.
Experimental results indicate that the proposed method achieves superior hit rates and substantially smaller distance errors compared with state-of-the-art methods.
arXiv Detail & Related papers (2022-06-30T13:04:42Z) - Automated Cardiac Resting Phase Detection Targeted on the Right Coronary
Artery [5.227072666312533]
The proposed prototype system consists of three main steps.
First, the localization of the regions of interest (ROI) is performed.
Second, the cropped ROI series over all time points are taken for tracking motions quantitatively.
Third, the output motion values are used to classify RPs.
arXiv Detail & Related papers (2021-09-06T10:29:52Z) - Deep Implicit Statistical Shape Models for 3D Medical Image Delineation [47.78425002879612]
3D delineation of anatomical structures is a cardinal goal in medical imaging analysis.
Prior to deep learning, statistical shape models that imposed anatomical constraints and produced high quality surfaces were a core technology.
We present deep implicit statistical shape models (DISSMs), a new approach to delineation that marries the representation power of CNNs with the robustness of SSMs.
arXiv Detail & Related papers (2021-04-07T01:15:06Z) - Probabilistic 3D surface reconstruction from sparse MRI information [58.14653650521129]
We present a novel probabilistic deep learning approach for concurrent 3D surface reconstruction from sparse 2D MR image data and aleatoric uncertainty prediction.
Our method is capable of reconstructing large surface meshes from three quasi-orthogonal MR imaging slices from limited training sets.
arXiv Detail & Related papers (2020-10-05T14:18:52Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.