The Efficacy of Semantics-Preserving Transformations in Self-Supervised Learning for Medical Ultrasound
- URL: http://arxiv.org/abs/2504.07904v1
- Date: Thu, 10 Apr 2025 16:26:47 GMT
- Title: The Efficacy of Semantics-Preserving Transformations in Self-Supervised Learning for Medical Ultrasound
- Authors: Blake VanBerlo, Alexander Wong, Jesse Hoey, Robert Arntfield,
- Abstract summary: This study systematically investigated the impact of data augmentation and preprocessing strategies in self-supervised learning for lung ultrasound.<n>Three data augmentation pipelines were assessed: a baseline pipeline commonly used across imaging domains, a novel semantic-preserving pipeline designed for ultrasound, and a distilled set of the most effective transformations from both pipelines.
- Score: 60.80780313225093
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Data augmentation is a central component of joint embedding self-supervised learning (SSL). Approaches that work for natural images may not always be effective in medical imaging tasks. This study systematically investigated the impact of data augmentation and preprocessing strategies in SSL for lung ultrasound. Three data augmentation pipelines were assessed: (1) a baseline pipeline commonly used across imaging domains, (2) a novel semantic-preserving pipeline designed for ultrasound, and (3) a distilled set of the most effective transformations from both pipelines. Pretrained models were evaluated on multiple classification tasks: B-line detection, pleural effusion detection, and COVID-19 classification. Experiments revealed that semantics-preserving data augmentation resulted in the greatest performance for COVID-19 classification - a diagnostic task requiring global image context. Cropping-based methods yielded the greatest performance on the B-line and pleural effusion object classification tasks, which require strong local pattern recognition. Lastly, semantics-preserving ultrasound image preprocessing resulted in increased downstream performance for multiple tasks. Guidance regarding data augmentation and preprocessing strategies was synthesized for practitioners working with SSL in ultrasound.
Related papers
- PathSegDiff: Pathology Segmentation using Diffusion model representations [63.20694440934692]
We propose PathSegDiff, a novel approach for histopathology image segmentation that leverages Latent Diffusion Models (LDMs) as pre-trained featured extractors.<n>Our method utilizes a pathology-specific LDM, guided by a self-supervised encoder, to extract rich semantic information from H&E stained histopathology images.<n>Our experiments demonstrate significant improvements over traditional methods on the BCSS and GlaS datasets.
arXiv Detail & Related papers (2025-04-09T14:58:21Z) - MEDDAP: Medical Dataset Enhancement via Diversified Augmentation Pipeline [1.4910709350090976]
We introduce a novel pipeline called MEDDAP to augment existing small datasets by automatically generating new informative labeled samples.
USLoRA allows for selective fine-tuning of weights within SD, requiring fewer than 0.1% of parameters compared to fully fine-tuning only the UNet portion of SD.
This approach is inspired by clinicians' decision-making processes regarding breast tumors, where tumor shape often plays a more crucial role than intensity.
arXiv Detail & Related papers (2024-03-25T00:17:43Z) - CathFlow: Self-Supervised Segmentation of Catheters in Interventional Ultrasound Using Optical Flow and Transformers [66.15847237150909]
We introduce a self-supervised deep learning architecture to segment catheters in longitudinal ultrasound images.
The network architecture builds upon AiAReSeg, a segmentation transformer built with the Attention in Attention mechanism.
We validated our model on a test dataset, consisting of unseen synthetic data and images collected from silicon aorta phantoms.
arXiv Detail & Related papers (2024-03-21T15:13:36Z) - AiAReSeg: Catheter Detection and Segmentation in Interventional
Ultrasound using Transformers [75.20925220246689]
endovascular surgeries are performed using the golden standard of Fluoroscopy, which uses ionising radiation to visualise catheters and vasculature.
This work proposes a solution using an adaptation of a state-of-the-art machine learning transformer architecture to detect and segment catheters in axial interventional Ultrasound image sequences.
arXiv Detail & Related papers (2023-09-25T19:34:12Z) - LOTUS: Learning to Optimize Task-based US representations [39.81131738128329]
Anatomical segmentation of organs in ultrasound images is essential to many clinical applications.
Existing deep neural networks require a large amount of labeled data for training in order to achieve clinically acceptable performance.
In this paper, we propose a novel approach for learning to optimize task-based ultra-sound image representations.
arXiv Detail & Related papers (2023-07-29T16:29:39Z) - OADAT: Experimental and Synthetic Clinical Optoacoustic Data for
Standardized Image Processing [62.993663757843464]
Optoacoustic (OA) imaging is based on excitation of biological tissues with nanosecond-duration laser pulses followed by detection of ultrasound waves generated via light-absorption-mediated thermoelastic expansion.
OA imaging features a powerful combination between rich optical contrast and high resolution in deep tissues.
No standardized datasets generated with different types of experimental set-up and associated processing methods are available to facilitate advances in broader applications of OA in clinical settings.
arXiv Detail & Related papers (2022-06-17T08:11:26Z) - Voice-assisted Image Labelling for Endoscopic Ultrasound Classification
using Neural Networks [48.732863591145964]
We propose a multi-modal convolutional neural network architecture that labels endoscopic ultrasound (EUS) images from raw verbal comments provided by a clinician during the procedure.
Our results show a prediction accuracy of 76% at image level on a dataset with 5 different labels.
arXiv Detail & Related papers (2021-10-12T21:22:24Z) - Ultrasound Image Classification using ACGAN with Small Training Dataset [0.0]
Training deep learning models requires large labeled datasets, which is often unavailable for ultrasound images.
We exploit Generative Adversarial Network (ACGAN) that combines the benefits of large data augmentation and transfer learning.
We conduct experiment on a dataset of breast ultrasound images that shows the effectiveness of the proposed approach.
arXiv Detail & Related papers (2021-01-31T11:11:24Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.