Diffusion Bridge Models for 3D Medical Image Translation
- URL: http://arxiv.org/abs/2504.15267v1
- Date: Mon, 21 Apr 2025 17:49:06 GMT
- Title: Diffusion Bridge Models for 3D Medical Image Translation
- Authors: Shaorong Zhang, Tamoghna Chattopadhyay, Sophia I. Thomopoulos, Jose-Luis Ambite, Paul M. Thompson, Greg Ver Steeg,
- Abstract summary: We propose a diffusion bridge model for 3D brain image translation between T1w MRI and DTI modalities.<n>Our model learns to generate high-quality DTI fractional anisotropy images from T1w images and vice versa, enabling cross-modality data augmentation.
- Score: 15.751276389741877
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Diffusion tensor imaging (DTI) provides crucial insights into the microstructure of the human brain, but it can be time-consuming to acquire compared to more readily available T1-weighted (T1w) magnetic resonance imaging (MRI). To address this challenge, we propose a diffusion bridge model for 3D brain image translation between T1w MRI and DTI modalities. Our model learns to generate high-quality DTI fractional anisotropy (FA) images from T1w images and vice versa, enabling cross-modality data augmentation and reducing the need for extensive DTI acquisition. We evaluate our approach using perceptual similarity, pixel-level agreement, and distributional consistency metrics, demonstrating strong performance in capturing anatomical structures and preserving information on white matter integrity. The practical utility of the synthetic data is validated through sex classification and Alzheimer's disease classification tasks, where the generated images achieve comparable performance to real data. Our diffusion bridge model offers a promising solution for improving neuroimaging datasets and supporting clinical decision-making, with the potential to significantly impact neuroimaging research and clinical practice.
Related papers
- Latent Drifting in Diffusion Models for Counterfactual Medical Image Synthesis [55.959002385347645]
Latent Drifting enables diffusion models to be conditioned for medical images fitted for the complex task of counterfactual image generation.<n>We evaluate our method on three public longitudinal benchmark datasets of brain MRI and chest X-rays for counterfactual image generation.
arXiv Detail & Related papers (2024-12-30T01:59:34Z) - Enhancing Angular Resolution via Directionality Encoding and Geometric Constraints in Brain Diffusion Tensor Imaging [70.66500060987312]
Diffusion-weighted imaging (DWI) is a type of Magnetic Resonance Imaging (MRI) technique sensitised to the diffusivity of water molecules.
This work proposes DirGeo-DTI, a deep learning-based method to estimate reliable DTI metrics even from a set of DWIs acquired with the minimum theoretical number (6) of gradient directions.
arXiv Detail & Related papers (2024-09-11T11:12:26Z) - Neurovascular Segmentation in sOCT with Deep Learning and Synthetic Training Data [4.5276169699857505]
This study demonstrates a synthesis engine for neurovascular segmentation in serial-section optical coherence tomography images.
Our approach comprises two phases: label synthesis and label-to-image transformation.
We demonstrate the efficacy of the former by comparing it to several more realistic sets of training labels, and the latter by an ablation study of synthetic noise and artifact models.
arXiv Detail & Related papers (2024-07-01T16:09:07Z) - Super-resolution of biomedical volumes with 2D supervision [84.5255884646906]
Masked slice diffusion for super-resolution exploits the inherent equivalence in the data-generating distribution across all spatial dimensions of biological specimens.
We focus on the application of SliceR to stimulated histology (SRH), characterized by its rapid acquisition of high-resolution 2D images but slow and costly optical z-sectioning.
arXiv Detail & Related papers (2024-04-15T02:41:55Z) - SDR-Former: A Siamese Dual-Resolution Transformer for Liver Lesion
Classification Using 3D Multi-Phase Imaging [59.78761085714715]
This study proposes a novel Siamese Dual-Resolution Transformer (SDR-Former) framework for liver lesion classification.
The proposed framework has been validated through comprehensive experiments on two clinical datasets.
To support the scientific community, we are releasing our extensive multi-phase MR dataset for liver lesion analysis to the public.
arXiv Detail & Related papers (2024-02-27T06:32:56Z) - FDDM: Unsupervised Medical Image Translation with a Frequency-Decoupled Diffusion Model [2.2726755789556794]
We introduce the Frequency Decoupled Diffusion Model for MR-to-CT conversion.
Our model uses a dual-path reverse diffusion process for low-frequency and high-frequency information.
It can generate high-quality target domain images while maintaining the accuracy of translated anatomical structures.
arXiv Detail & Related papers (2023-11-19T19:44:44Z) - DiffBoost: Enhancing Medical Image Segmentation via Text-Guided Diffusion Model [3.890243179348094]
Large-scale, big-variant, high-quality data are crucial for developing robust and successful deep-learning models for medical applications.<n>This paper proposes a novel approach by developing controllable diffusion models for medical image synthesis, called DiffBoost.<n>We leverage recent diffusion probabilistic models to generate realistic and diverse synthetic medical image data.
arXiv Detail & Related papers (2023-10-19T16:18:02Z) - Medical Diffusion -- Denoising Diffusion Probabilistic Models for 3D
Medical Image Generation [0.6486409713123691]
We show that diffusion probabilistic models can synthesize high quality medical imaging data.
We provide quantitative measurements of their performance through a reader study with two medical experts.
We demonstrate that synthetic images can be used in a self-supervised pre-training and improve the performance of breast segmentation models when data is scarce.
arXiv Detail & Related papers (2022-11-07T08:37:48Z) - TW-BAG: Tensor-wise Brain-aware Gate Network for Inpainting Disrupted
Diffusion Tensor Imaging [32.02624872108258]
We propose a novel 3D-Wise-Aware Gate network (TW-BAG) for inpainting disrupted Diffusion Weighted Imaging (DTI) slices.
We evaluated the proposed method on the publicly available Human Connectome Project (HCP) dataset.
Our experimental results show that the proposed approach can reconstruct the original brain DTI volume and recover relevant clinical imaging information.
arXiv Detail & Related papers (2022-10-31T05:53:02Z) - Negligible effect of brain MRI data preprocessing for tumor segmentation [36.89606202543839]
We conduct experiments on three publicly available datasets and evaluate the effect of different preprocessing steps in deep neural networks.
Our results demonstrate that most popular standardization steps add no value to the network performance.
We suggest that image intensity normalization approaches do not contribute to model accuracy because of the reduction of signal variance with image standardization.
arXiv Detail & Related papers (2022-04-11T17:29:36Z) - Hierarchical Amortized Training for Memory-efficient High Resolution 3D
GAN [52.851990439671475]
We propose a novel end-to-end GAN architecture that can generate high-resolution 3D images.
We achieve this goal by using different configurations between training and inference.
Experiments on 3D thorax CT and brain MRI demonstrate that our approach outperforms state of the art in image generation.
arXiv Detail & Related papers (2020-08-05T02:33:04Z) - Multifold Acceleration of Diffusion MRI via Slice-Interleaved Diffusion
Encoding (SIDE) [50.65891535040752]
We propose a diffusion encoding scheme, called Slice-Interleaved Diffusion.
SIDE, that interleaves each diffusion-weighted (DW) image volume with slices encoded with different diffusion gradients.
We also present a method based on deep learning for effective reconstruction of DW images from the highly slice-undersampled data.
arXiv Detail & Related papers (2020-02-25T14:48:17Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.