Mamba Goes HoME: Hierarchical Soft Mixture-of-Experts for 3D Medical Image Segmentation
- URL: http://arxiv.org/abs/2507.06363v1
- Date: Tue, 08 Jul 2025 19:57:27 GMT
- Title: Mamba Goes HoME: Hierarchical Soft Mixture-of-Experts for 3D Medical Image Segmentation
- Abstract summary: Hierarchical Soft Mixture-of-Experts (HoME) is a token-routing layer for efficient long-context modeling.<n>Built on the Mamba state-space model (SSM) backbone, HoME enhances sequential modeling through sparse, adaptive expert routing.<n>This hierarchical design, combining local expert routing with global expert refinement improves generalizability and segmentation performance.
- Score: 0.17975553762582286
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: In recent years, artificial intelligence has significantly advanced medical image segmentation. However, challenges remain, including efficient 3D medical image processing across diverse modalities and handling data variability. In this work, we introduce Hierarchical Soft Mixture-of-Experts (HoME), a two-level token-routing layer for efficient long-context modeling, specifically designed for 3D medical image segmentation. Built on the Mamba state-space model (SSM) backbone, HoME enhances sequential modeling through sparse, adaptive expert routing. The first stage employs a Soft Mixture-of-Experts (SMoE) layer to partition input sequences into local groups, routing tokens to specialized per-group experts for localized feature extraction. The second stage aggregates these outputs via a global SMoE layer, enabling cross-group information fusion and global context refinement. This hierarchical design, combining local expert routing with global expert refinement improves generalizability and segmentation performance, surpassing state-of-the-art results across datasets from the three most commonly used 3D medical imaging modalities and data quality.
Related papers
- MedPruner: Training-Free Hierarchical Token Pruning for Efficient 3D Medical Image Understanding in Vision-Language Models [59.180043227905294]
We propose MedPruner, a training-free and model-agnostic hierarchical token pruning framework for efficient 3D medical image understanding.<n>We show that MedPruner enables models such as MedGemma to maintain or even exceed their original performance while retaining fewer than 5% of visual tokens.
arXiv Detail & Related papers (2026-03-12T07:37:00Z) - Multimodal Visual Surrogate Compression for Alzheimer's Disease Classification [69.87877580725768]
Multimodal Visual Surrogate Compression (MVSC) learns to compress and adapt large 3D sMRI volumes into compact 2D features.<n>MVSC has two key components: a Volume Context that captures global cross-slice context under textual guidance, and an Adaptive Slice Fusion module that aggregates slice-level information in a text-enhanced, patch-wise manner.
arXiv Detail & Related papers (2026-01-29T13:05:46Z) - HybridMamba: A Dual-domain Mamba for 3D Medical Image Segmentation [12.595264673714025]
Mamba exhibits the superior performance for it addresses the limitations in modeling long-range dependencies inherent to CNNs.<n>We propose the HybridMamba, an architecture employing dual complementary mechanisms.<n> Experiments on MRI and CT datasets demonstrate that HybridMamba significantly outperforms the state-of-the-art methods in 3D medical image segmentation.
arXiv Detail & Related papers (2025-09-18T04:32:49Z) - MedSeqFT: Sequential Fine-tuning Foundation Models for 3D Medical Image Segmentation [55.37355146924576]
MedSeqFT is a sequential fine-tuning framework for medical image analysis.<n>It adapts pre-trained models to new tasks while refining their representational capacity.<n>It consistently outperforms state-of-the-art fine-tuning strategies.
arXiv Detail & Related papers (2025-09-07T15:22:53Z) - TK-Mamba: Marrying KAN with Mamba for Text-Driven 3D Medical Image Segmentation [22.62310549476759]
3D medical image segmentation is vital for clinical diagnosis and treatment.<n>Traditional single-modality networks, such as CNNs and Transformers, are often limited by computational inefficiency and constrained contextual modeling.<n>We introduce a novel multimodal framework that leverages Mamba and Kolmogorov-Arnold Networks (KAN) as an efficient backbone for long-sequence modeling.
arXiv Detail & Related papers (2025-05-24T05:41:55Z) - Mamba Based Feature Extraction And Adaptive Multilevel Feature Fusion For 3D Tumor Segmentation From Multi-modal Medical Image [8.999013226631893]
Multi-modal 3D medical image segmentation aims to accurately identify tumor regions across different modalities.<n>Traditional convolutional neural network (CNN)-based methods struggle with capturing global features.<n>Transformers-based methods, despite effectively capturing global context, encounter high computational costs in 3D medical image segmentation.
arXiv Detail & Related papers (2025-04-30T03:29:55Z) - MRGen: Segmentation Data Engine For Underrepresented MRI Modalities [59.61465292965639]
Training medical image segmentation models for rare yet clinically significant imaging modalities is challenging due to the scarcity of annotated data.<n>This paper investigates leveraging generative models to synthesize training data, to train segmentation models for underrepresented modalities.
arXiv Detail & Related papers (2024-12-04T16:34:22Z) - Improving 3D Medical Image Segmentation at Boundary Regions using Local Self-attention and Global Volume Mixing [14.0825980706386]
Volumetric medical image segmentation is a fundamental problem in medical image analysis where the objective is to accurately classify a given 3D volumetric medical image with voxel-level precision.
In this work, we propose a novel hierarchical encoder-decoder-based framework that strives to explicitly capture the local and global dependencies for 3D medical image segmentation.
The proposed framework exploits local volume-based self-attention to encode the local dependencies at high resolution and introduces a novel volumetric-mixer to capture the global dependencies at low-resolution feature representations.
arXiv Detail & Related papers (2024-10-20T11:08:38Z) - PMT: Progressive Mean Teacher via Exploring Temporal Consistency for Semi-Supervised Medical Image Segmentation [51.509573838103854]
We propose a semi-supervised learning framework, termed Progressive Mean Teachers (PMT), for medical image segmentation.
Our PMT generates high-fidelity pseudo labels by learning robust and diverse features in the training process.
Experimental results on two datasets with different modalities, i.e., CT and MRI, demonstrate that our method outperforms the state-of-the-art medical image segmentation approaches.
arXiv Detail & Related papers (2024-09-08T15:02:25Z) - ShapeMamba-EM: Fine-Tuning Foundation Model with Local Shape Descriptors and Mamba Blocks for 3D EM Image Segmentation [49.42525661521625]
This paper presents ShapeMamba-EM, a specialized fine-tuning method for 3D EM segmentation.
It is tested over a wide range of EM images, covering five segmentation tasks and 10 datasets.
arXiv Detail & Related papers (2024-08-26T08:59:22Z) - Swin SMT: Global Sequential Modeling in 3D Medical Image Segmentation [4.915744683251151]
We introduce Swin Soft Mixture Transformer (Swin SMT), a novel architecture based on Swin UNETR.
This model incorporates a Soft Mixture-of-Experts (Soft MoE) to effectively handle complex and diverse long-range dependencies.
We evaluate Swin SMT on the publicly available TotalSegmentator-V2 dataset, which includes 117 major anatomical structures in WBCT images.
arXiv Detail & Related papers (2024-07-10T10:05:22Z) - Discriminative Hamiltonian Variational Autoencoder for Accurate Tumor Segmentation in Data-Scarce Regimes [2.8498944632323755]
We propose an end-to-end hybrid architecture for medical image segmentation.
We use Hamiltonian Variational Autoencoders (HVAE) and a discriminative regularization to improve the quality of generated images.
Our architecture operates on a slice-by-slice basis to segment 3D volumes, capitilizing on the richly augmented dataset.
arXiv Detail & Related papers (2024-06-17T15:42:08Z) - SDR-Former: A Siamese Dual-Resolution Transformer for Liver Lesion
Classification Using 3D Multi-Phase Imaging [59.78761085714715]
This study proposes a novel Siamese Dual-Resolution Transformer (SDR-Former) framework for liver lesion classification.
The proposed framework has been validated through comprehensive experiments on two clinical datasets.
To support the scientific community, we are releasing our extensive multi-phase MR dataset for liver lesion analysis to the public.
arXiv Detail & Related papers (2024-02-27T06:32:56Z) - M$^{2}$SNet: Multi-scale in Multi-scale Subtraction Network for Medical
Image Segmentation [73.10707675345253]
We propose a general multi-scale in multi-scale subtraction network (M$2$SNet) to finish diverse segmentation from medical image.
Our method performs favorably against most state-of-the-art methods under different evaluation metrics on eleven datasets of four different medical image segmentation tasks.
arXiv Detail & Related papers (2023-03-20T06:26:49Z) - Unpaired Multi-modal Segmentation via Knowledge Distillation [77.39798870702174]
We propose a novel learning scheme for unpaired cross-modality image segmentation.
In our method, we heavily reuse network parameters, by sharing all convolutional kernels across CT and MRI.
We have extensively validated our approach on two multi-class segmentation problems.
arXiv Detail & Related papers (2020-01-06T20:03:17Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.