MatSKRAFT: A framework for large-scale materials knowledge extraction from scientific tables
- URL: http://arxiv.org/abs/2509.10448v1
- Date: Fri, 12 Sep 2025 17:55:11 GMT
- Title: MatSKRAFT: A framework for large-scale materials knowledge extraction from scientific tables
- Abstract summary: MatSKRAFT is a framework that automatically extracts and integrates materials science knowledge from tabular data at unprecedented scale.<n>MatSKRAFT significantly outperforms state-of-the-art large language models, achieving F1 scores of 88.68 for property extraction and 71.35 for composition extraction.
- Score: 19.837905352477453
- License: http://creativecommons.org/licenses/by-nc-nd/4.0/
- Abstract: Scientific progress increasingly depends on synthesizing knowledge across vast literature, yet most experimental data remains trapped in semi-structured formats that resist systematic extraction and analysis. Here, we present MatSKRAFT, a computational framework that automatically extracts and integrates materials science knowledge from tabular data at unprecedented scale. Our approach transforms tables into graph-based representations processed by constraint-driven GNNs that encode scientific principles directly into model architecture. MatSKRAFT significantly outperforms state-of-the-art large language models, achieving F1 scores of 88.68 for property extraction and 71.35 for composition extraction, while processing data $19$-$496\times$ faster than them (compared to the slowest and the fastest models, respectively) with modest hardware requirements. Applied to nearly 69,000 tables from more than 47,000 research publications, we construct a comprehensive database containing over 535,000 entries, including 104,000 compositions that expand coverage beyond major existing databases, pending manual validation. This systematic approach reveals previously overlooked materials with distinct property combinations and enables data-driven discovery of composition-property relationships forming the cornerstone of materials and scientific discovery.
Related papers
- HERMES: a multi-agent framework for structured knowledge extraction from ultra-long documents in geoscience [41.77130029890288]
HERMES is a scalable multi-agent framework that extracts structured data from scientific documents.<n>It integrates domain constraints, validation rules and evidence tracing within a unified document-level extraction process.<n>The system produced a structured database of 32,277 fossil entities and 451,878 attributes, released online at https://treatise.geolex.org.
arXiv Detail & Related papers (2026-08-14T07:59:58Z) - Large language model-enabled automated data extraction for concrete materials informatics [0.0]
We introduce a generalizable large language model (LLM)-powered pipeline for automated extraction and structuring of materials data from unstructured scientific literature.<n>Within one hour, it extracts nearly 9,000 high-quality records with over 100 attributes screened from more than 27,000 publications.
arXiv Detail & Related papers (2026-04-24T18:24:19Z) - LeMat-Synth: a multi-modal toolbox to curate broad synthesis procedure databases from scientific literature [60.879220305044726]
We propose a multi-modal toolbox that employs large language models (LLMs) and vision language models (VLMs) to automatically extract and organize synthesis procedures and performance data.<n>We curated 81k open-access papers, yielding LeMat- Synth (v 1.0): a dataset containing synthesis procedures spanning 35 synthesis methods and 16 material classes.<n>We release a modular, open-source library designed to support community-driven extension to new corpora and synthesis domains.
arXiv Detail & Related papers (2025-10-28T17:58:18Z) - ComProScanner: A multi-agent based framework for composition-property structured data extraction from scientific literature [0.2447206672789868]
ComProScanner is an autonomous multi-agent platform that facilitates the extraction, validation, classification, and visualisation of chemical compositions and properties.<n>We evaluated our framework using 100 journal articles against 10 different LLMs, including both open-source and proprietary models.<n>DeepSeek-V3-0324 outperformed all models with a significant overall accuracy of 0.82.
arXiv Detail & Related papers (2025-10-23T09:01:44Z) - "DIVE" into Hydrogen Storage Materials Discovery with AI Agents [8.774584882332526]
Data-driven artificial intelligence (AI) approaches are transforming the discovery of new materials.<n>We present the Descriptive Interpretation of Visual Expression (DIVE) multi-agent workflow, which reads and organizes experimental data from graphical elements in scientific literatures.<n>Building on a curated database of over 30,000 entries from 4,000 publications, we establish a rapid inverse design workflow capable of identifying previously unreported hydrogen storage compositions in two minutes.
arXiv Detail & Related papers (2025-08-18T14:30:18Z) - zERExtractor:An Automated Platform for Enzyme-Catalyzed Reaction Data Extraction from Scientific Literature [12.109637682144125]
zERExtractor is an automated platform for comprehensive extraction of enzyme-catalyzed reaction and activity data from scientific literature.<n>Our pipeline combines domain-adapted deep learning, advanced OCR, semantic entity recognition, and prompt-driven LLM modules.<n>We release a large benchmark dataset comprising over 1,000 annotated tables and 5,000 biological fields from 270 P450-related enzymology publications.
arXiv Detail & Related papers (2025-07-30T07:21:32Z) - A Materials Map Integrating Experimental and Computational Data via Graph-Based Machine Learning for Enhanced Materials Discovery [5.06756291053173]
Materials informatics (MI) is expected to significantly accelerate material development and discovery.<n>Data used in MI are derived from both computational and experimental studies.<n>In this study, we use the obtained datasets to construct materials maps, which visualize the relationships between material properties and structural features.
arXiv Detail & Related papers (2025-03-10T14:31:34Z) - BIOMEDICA: An Open Biomedical Image-Caption Archive, Dataset, and Vision-Language Models Derived from Scientific Literature [73.39593644054865]
BIOMEDICA is a scalable, open-source framework to extract, annotate, and serialize the entirety of the PubMed Central Open Access subset into an easy-to-use, publicly accessible dataset.<n>Our framework produces a comprehensive archive with over 24 million unique image-text pairs from over 6 million articles.<n> BMCA-CLIP is a suite of CLIP-style models continuously pretrained on the BIOMEDICA dataset via streaming, eliminating the need to download 27 TB of data locally.
arXiv Detail & Related papers (2025-01-13T09:58:03Z) - DARWIN 1.5: Large Language Models as Materials Science Adapted Learners [46.7259033847682]
We propose DARWIN 1.5, the largest open-source large language model tailored for materials science.<n> DARWIN eliminates the need for task-specific descriptors and enables a flexible, unified approach to material property prediction and discovery.<n>Our approach integrates 6M material domain papers and 21 experimental datasets from 49,256 materials across modalities while enabling cross-task knowledge transfer.
arXiv Detail & Related papers (2024-12-16T16:51:27Z) - Foundation Model for Composite Microstructures: Reconstruction, Stiffness, and Nonlinear Behavior Prediction [0.0]
We present the Material Masked Autoencoder (MMAE), a self-supervised Vision Transformer pretrained on a large corpus of short-fiber composite images.<n>We demonstrate two key applications: (i) predicting homogenized stiffness components through fine-tuning on limited data, and (ii) inferring physically interpretable parameters by coupling MMAE with an interaction-based material network.
arXiv Detail & Related papers (2024-11-10T19:06:25Z) - SciER: An Entity and Relation Extraction Dataset for Datasets, Methods, and Tasks in Scientific Documents [49.54155332262579]
We release a new entity and relation extraction dataset for entities related to datasets, methods, and tasks in scientific articles.
Our dataset contains 106 manually annotated full-text scientific publications with over 24k entities and 12k relations.
arXiv Detail & Related papers (2024-10-28T15:56:49Z) - SciRIFF: A Resource to Enhance Language Model Instruction-Following over Scientific Literature [80.49349719239584]
We present SciRIFF (Scientific Resource for Instruction-Following and Finetuning), a dataset of 137K instruction-following demonstrations for 54 tasks.
SciRIFF is the first dataset focused on extracting and synthesizing information from research literature across a wide range of scientific fields.
arXiv Detail & Related papers (2024-06-10T21:22:08Z) - Why Tabular Foundation Models Should Be a Research Priority [65.75744962286538]
Tabular data is the dominant modality in many fields, yet it is given hardly any research attention and significantly lags behind in terms of scale and power.
We believe the time is now to start developing tabular foundation models, or what we coin a Large Tabular Model (LTM)
arXiv Detail & Related papers (2024-05-02T10:05:16Z) - Extracting Structured Seed-Mediated Gold Nanorod Growth Procedures from
Literature with GPT-3 [52.59930033705221]
We present a dataset of 11,644 entities extracted from 1,137 papers, resulting in 268 papers with at least one complete seed-mediated gold nanorod growth procedure and outcome for a total of 332 complete procedures.
We present a dataset of 11,644 entities extracted from 1,137 papers, resulting in papers with at least one complete seed-mediated gold nanorod growth procedure and outcome for a total of 332 complete procedures.
arXiv Detail & Related papers (2023-04-26T22:21:33Z) - DiSCoMaT: Distantly Supervised Composition Extraction from Tables in
Materials Science Articles [25.907266860321727]
We define a novel NLP task of extracting compositions of materials from tables in materials science papers.
We release a training dataset comprising 4,408 distantly supervised tables, along with 1,475 manually annotated dev and test tables.
We show that DISCOMAT outperforms recent table processing architectures by significant margins.
arXiv Detail & Related papers (2022-07-03T17:11:17Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.