Acquisition Time-Informed Breast Tumor Segmentation from Dynamic Contrast-Enhanced MRI
- URL: http://arxiv.org/abs/2511.16498v1
- Date: Thu, 20 Nov 2025 16:13:24 GMT
- Title: Acquisition Time-Informed Breast Tumor Segmentation from Dynamic Contrast-Enhanced MRI
- Authors: Rui Wang, Yuexi Du, John Lewin, R. Todd Constable, Nicha C. Dvornek,
- Abstract summary: Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) plays an important role in breast cancer screening, tumor assessment, and treatment planning and monitoring.<n>Various acquisition protocols and individual factors result in large variation in the appearance of tissues, even for images acquired in the same phase.<n>Here, we propose a tumor segmentation method that leverages knowledge of the image acquisition time to modulate model features according to the specific acquisition sequence.
- Score: 5.2726717832127035
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) plays an important role in breast cancer screening, tumor assessment, and treatment planning and monitoring. The dynamic changes in contrast in different tissues help to highlight the tumor in post-contrast images. However, varying acquisition protocols and individual factors result in large variation in the appearance of tissues, even for images acquired in the same phase (e.g., first post-contrast phase), making automated tumor segmentation challenging. Here, we propose a tumor segmentation method that leverages knowledge of the image acquisition time to modulate model features according to the specific acquisition sequence. We incorporate the acquisition times using feature-wise linear modulation (FiLM) layers, a lightweight method for incorporating temporal information that also allows for capitalizing on the full, variables number of images acquired per imaging study. We trained baseline and different configurations for the time-modulated models with varying backbone architectures on a large public multisite breast DCE-MRI dataset. Evaluation on in-domain images and a public out-of-domain dataset showed that incorporating knowledge of phase acquisition time improved tumor segmentation performance and model generalization.
Related papers
- Clinical Inspired MRI Lesion Segmentation [18.265186077850874]
We propose a residual fusion method to learn subsequence representation for MRI lesion segmentation.<n>Specifically, we iteratively and adaptively fuse features from pre- and post-contrast sequences at multiple resolutions.<n>Our method achieves state-of-the-art performances on BraTS2023 dataset for brain tumor segmentation and our in-house breast MRI dataset for breast lesion segmentation.
arXiv Detail & Related papers (2025-02-22T01:37:35Z) - Enhanced MRI Representation via Cross-series Masking [48.09478307927716]
Cross-Series Masking (CSM) Strategy for effectively learning MRI representation in a self-supervised manner.<n>Method achieves state-of-the-art performance on both public and in-house datasets.
arXiv Detail & Related papers (2024-12-10T10:32:09Z) - A Unified Model for Compressed Sensing MRI Across Undersampling Patterns [69.19631302047569]
We propose a unified MRI reconstruction model robust to various measurement undersampling patterns and image resolutions.<n>Our model improves SSIM by 11% and PSNR by 4 dB over a state-of-the-art CNN (End-to-End VarNet) with 600$times$ faster inference than diffusion methods.
arXiv Detail & Related papers (2024-10-05T20:03:57Z) - Synthesizing Late-Stage Contrast Enhancement in Breast MRI: A Comprehensive Pipeline Leveraging Temporal Contrast Enhancement Dynamics [0.3499870393443268]
This study presents a pipeline for synthesizing late-phase DCE-MRI images from early-phase data.<n>The proposed approach introduces a novel loss function, Time Intensity Loss (TI-loss), leveraging the temporal behavior of contrast agents to guide the training of a generative model.<n>Two metrics are proposed to evaluate image quality: the Contrast Agent Pattern Score ($mathcalCP_s$), which validates enhancement patterns in annotated regions, and the Average Difference in Enhancement ($mathcalED$), measuring differences between real and generated enhancements.
arXiv Detail & Related papers (2024-09-03T04:31:49Z) - Advancing Medical Image Segmentation: Morphology-Driven Learning with Diffusion Transformer [4.672688418357066]
We propose a novel Transformer Diffusion (DTS) model for robust segmentation in the presence of noise.
Our model, which analyzes the morphological representation of images, shows better results than the previous models in various medical imaging modalities.
arXiv Detail & Related papers (2024-08-01T07:35:54Z) - NeuroPictor: Refining fMRI-to-Image Reconstruction via Multi-individual Pretraining and Multi-level Modulation [55.51412454263856]
This paper proposes to directly modulate the generation process of diffusion models using fMRI signals.
By training with about 67,000 fMRI-image pairs from various individuals, our model enjoys superior fMRI-to-image decoding capacity.
arXiv Detail & Related papers (2024-03-27T02:42:52Z) - On Sensitivity and Robustness of Normalization Schemes to Input
Distribution Shifts in Automatic MR Image Diagnosis [58.634791552376235]
Deep Learning (DL) models have achieved state-of-the-art performance in diagnosing multiple diseases using reconstructed images as input.
DL models are sensitive to varying artifacts as it leads to changes in the input data distribution between the training and testing phases.
We propose to use other normalization techniques, such as Group Normalization and Layer Normalization, to inject robustness into model performance against varying image artifacts.
arXiv Detail & Related papers (2023-06-23T03:09:03Z) - Unsupervised Image Registration Towards Enhancing Performance and
Explainability in Cardiac And Brain Image Analysis [3.5718941645696485]
Inter- and intra-modality affine and non-rigid image registration is an essential medical image analysis process in clinical imaging.
We present an un-supervised deep learning registration methodology which can accurately model affine and non-rigid trans-formations.
Our methodology performs bi-directional cross-modality image synthesis to learn modality-invariant latent rep-resentations.
arXiv Detail & Related papers (2022-03-07T12:54:33Z) - Multi-modal Aggregation Network for Fast MR Imaging [85.25000133194762]
We propose a novel Multi-modal Aggregation Network, named MANet, which is capable of discovering complementary representations from a fully sampled auxiliary modality.
In our MANet, the representations from the fully sampled auxiliary and undersampled target modalities are learned independently through a specific network.
Our MANet follows a hybrid domain learning framework, which allows it to simultaneously recover the frequency signal in the $k$-space domain.
arXiv Detail & Related papers (2021-10-15T13:16:59Z) - Soft Tissue Sarcoma Co-Segmentation in Combined MRI and PET/CT Data [2.2515303891664358]
Tumor segmentation in multimodal medical images has seen a growing trend towards deep learning based methods.
We propose a simultaneous co-segmentation method, which enables multimodal feature learning through modality-specific encoder and decoder branches.
We demonstrate the effectiveness of our approach on public soft tissue sarcoma data, which comprises MRI (T1 and T2 sequence) and PET/CT scans.
arXiv Detail & Related papers (2020-08-28T09:15:42Z) - Pathological Retinal Region Segmentation From OCT Images Using Geometric
Relation Based Augmentation [84.7571086566595]
We propose improvements over previous GAN-based medical image synthesis methods by jointly encoding the intrinsic relationship of geometry and shape.
The proposed method outperforms state-of-the-art segmentation methods on the public RETOUCH dataset having images captured from different acquisition procedures.
arXiv Detail & Related papers (2020-03-31T11:50:43Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.