Semi-supervised Liver Segmentation and Patch-based Fibrosis Staging with Registration-aided Multi-parametric MRI
- URL: http://arxiv.org/abs/2602.09686v1
- Date: Tue, 10 Feb 2026 11:40:43 GMT
- Title: Semi-supervised Liver Segmentation and Patch-based Fibrosis Staging with Registration-aided Multi-parametric MRI
- Authors: Boya Wang, Ruizhe Li, Chao Chen, Xin Chen,
- Abstract summary: This study introduces a multi-task deep learning framework developed for liver segmentation (LiSeg) and liver fibrosis staging (LiFS) using multiparametric MRI.<n>The LiSeg phase addresses the challenge of limited annotated images by employing a semi-supervised learning model that integrates image segmentation and registration.<n>In the LiFS phase, we employed a patchbased method which allows the visualization of liver fibrosis stages based on the classification outputs.
- Score: 13.33205970973723
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Liver fibrosis poses a substantial challenge in clinical practice, emphasizing the necessity for precise liver segmentation and accurate disease staging. Based on the CARE Liver 2025 Track 4 Challenge, this study introduces a multi-task deep learning framework developed for liver segmentation (LiSeg) and liver fibrosis staging (LiFS) using multiparametric MRI. The LiSeg phase addresses the challenge of limited annotated images and the complexities of multi-parametric MRI data by employing a semi-supervised learning model that integrates image segmentation and registration. By leveraging both labeled and unlabeled data, the model overcomes the difficulties introduced by domain shifts and variations across modalities. In the LiFS phase, we employed a patchbased method which allows the visualization of liver fibrosis stages based on the classification outputs. Our approach effectively handles multimodality imaging data, limited labels, and domain shifts. The proposed method has been tested by the challenge organizer on an independent test set that includes in-distribution (ID) and out-of-distribution (OOD) cases using three-channel MRIs (T1, T2, DWI) and seven-channel MRIs (T1, T2, DWI, GED1-GED4). The code is freely available. Github link: https://github.com/mileywang3061/Care-Liver
Related papers
- Sim4Seg: Boosting Multimodal Multi-disease Medical Diagnosis Segmentation with Region-Aware Vision-Language Similarity Masks [54.00822479127598]
We introduce a medical vision-language task named Medical Diagnosis (MDS)<n>MDS aims to understand clinical queries for medical images and generate the corresponding segmentation masks as well as diagnostic results.<n>We propose Sim4Seg, a novel framework that improves the performance of diagnosis segmentation.
arXiv Detail & Related papers (2025-11-10T03:22:42Z) - Label-Efficient Cross-Modality Generalization for Liver Segmentation in Multi-Phase MRI [6.755224757651558]
We propose a label-efficient segmentation approach that promotes cross-modality generalization under real-world conditions.<n>Our method integrates a foundation-scale 3D segmentation backbone adapted via fine-tuning, co-training with cross pseudo supervision to leverage unlabeled volumes.<n>Our results exhibit the effectiveness of our proposed label-efficient baseline for liver segmentation in multi-phase, multi-vendor MRI.
arXiv Detail & Related papers (2025-10-06T11:19:05Z) - Multi-modal Liver Segmentation and Fibrosis Staging Using Real-world MRI Images [4.532336128355271]
Liver fibrosis represents the accumulation of excessive extracellular matrix caused by sustained hepatic injury.<n>Recent advances in artificial intelligence-based liver segmentation and fibrosis staging offer a non-invasive alternative.<n>The CARE 2025 Challenge aimed for automated methods to quantify and analyse liver fibrosis in real-world scenarios.
arXiv Detail & Related papers (2025-09-30T10:35:30Z) - SDR-Former: A Siamese Dual-Resolution Transformer for Liver Lesion
Classification Using 3D Multi-Phase Imaging [59.78761085714715]
This study proposes a novel Siamese Dual-Resolution Transformer (SDR-Former) framework for liver lesion classification.
The proposed framework has been validated through comprehensive experiments on two clinical datasets.
To support the scientific community, we are releasing our extensive multi-phase MR dataset for liver lesion analysis to the public.
arXiv Detail & Related papers (2024-02-27T06:32:56Z) - Joint Liver and Hepatic Lesion Segmentation in MRI using a Hybrid CNN
with Transformer Layers [2.055026516354464]
This work presents a hybrid network called SWTR-Unet, consisting of a pretrained ResNet, transformer blocks as well as a common Unet-style decoder path.
With Dice scores of averaged 98+-2% for liver and 81+-28% lesion segmentation on the MRI dataset and 97+-2% and 79+-25%, respectively on the CT dataset, the proposed SWTR-Unet proved to be a precise approach for liver and hepatic lesion segmentation.
arXiv Detail & Related papers (2022-01-26T14:52:23Z) - Unsupervised domain adaptation for cross-modality liver segmentation via
joint adversarial learning and self-learning [2.309675169959214]
Liver segmentation on images acquired using computed tomography (CT) and magnetic resonance imaging (MRI) plays an important role in clinical management of liver diseases.
In this work, we report a novel unsupervised domain adaptation framework for cross-modality liver segmentation via joint adversarial learning and self-learning.
arXiv Detail & Related papers (2021-09-13T01:46:28Z) - Edge-competing Pathological Liver Vessel Segmentation with Limited
Labels [61.38846803229023]
There is no algorithm as yet tailored for the MVI detection from pathological images.
This paper collects the first pathological liver image dataset containing 522 whole slide images with labels of vessels, MVI, and carcinoma grades.
We propose an Edge-competing Vessel Network (EVS-Net) which contains a segmentation network and two edge segmentation discriminators.
arXiv Detail & Related papers (2021-08-01T07:28:32Z) - Modality Completion via Gaussian Process Prior Variational Autoencoders
for Multi-Modal Glioma Segmentation [75.58395328700821]
We propose a novel model, Multi-modal Gaussian Process Prior Variational Autoencoder (MGP-VAE), to impute one or more missing sub-modalities for a patient scan.
MGP-VAE can leverage the Gaussian Process (GP) prior on the Variational Autoencoder (VAE) to utilize the subjects/patients and sub-modalities correlations.
We show the applicability of MGP-VAE on brain tumor segmentation where either, two, or three of four sub-modalities may be missing.
arXiv Detail & Related papers (2021-07-07T19:06:34Z) - FetReg: Placental Vessel Segmentation and Registration in Fetoscopy
Challenge Dataset [57.30136148318641]
Fetoscopy laser photocoagulation is a widely used procedure for the treatment of Twin-to-Twin Transfusion Syndrome (TTTS)
This may lead to increased procedural time and incomplete ablation, resulting in persistent TTTS.
Computer-assisted intervention may help overcome these challenges by expanding the fetoscopic field of view through video mosaicking and providing better visualization of the vessel network.
We present a large-scale multi-centre dataset for the development of generalized and robust semantic segmentation and video mosaicking algorithms for the fetal environment with a focus on creating drift-free mosaics from long duration fetoscopy videos.
arXiv Detail & Related papers (2021-06-10T17:14:27Z) - Cross-Modality Brain Tumor Segmentation via Bidirectional
Global-to-Local Unsupervised Domain Adaptation [61.01704175938995]
In this paper, we propose a novel Bidirectional Global-to-Local (BiGL) adaptation framework under a UDA scheme.
Specifically, a bidirectional image synthesis and segmentation module is proposed to segment the brain tumor.
The proposed method outperforms several state-of-the-art unsupervised domain adaptation methods by a large margin.
arXiv Detail & Related papers (2021-05-17T10:11:45Z) - Multi-Slice Low-Rank Tensor Decomposition Based Multi-Atlas
Segmentation: Application to Automatic Pathological Liver CT Segmentation [4.262342157729123]
Liver segmentation from abdominal CT images is an essential step for liver cancer computer-aided diagnosis and surgical planning.
Currently, the accuracy and robustness of existing liver segmentation methods cannot meet the requirements of clinical applications.
We propose a novel low-rank tensor decomposition (LRTD) based multi-atlas segmentation (MAS) framework that achieves accurate and robust pathological liver segmentation of CT images.
arXiv Detail & Related papers (2021-02-24T04:09:39Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.