Evaluating quality in synthetic data generation for large tabular health datasets
- URL: http://arxiv.org/abs/2604.15961v1
- Date: Fri, 17 Apr 2026 11:28:25 GMT
- Title: Evaluating quality in synthetic data generation for large tabular health datasets
- Abstract summary: There is no consensus in the field of synthetic data on concise metrics for quality evaluations or benchmarks on large health datasets.<n>This study presents an evaluation of seven recent models from major machine learning families.<n>We propose a methodology for evaluating the fidelity of synthesized joint distributions, aligning metrics with visualization on a single plot.
- Score: 0.010865969683301856
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: There is no consensus in the field of synthetic data on concise metrics for quality evaluations or benchmarks on large health datasets, such as historical epidemiological data. This study presents an evaluation of seven recent models from major machine learning families. The models were evaluated using four different datasets, each with a distinct scale. To ensure a fair comparison, we systematically tuned the hyperparameters of each model for each dataset. We propose a methodology for evaluating the fidelity of synthesized joint distributions, aligning metrics with visualization on a single plot. This method is applicable to any dataset and is complemented by a domain-specific analysis of the German Cancer Registries' epidemiological dataset. The analysis reveals the challenges models face in strictly adhering to the medical domain. We hope this approach will serve as a foundational framework for guiding the selection of synthesizers and remain accessible to all stakeholders involved in releasing synthetic datasets.
Related papers
- FRESH: Information-Geometric Calibration of Patient-Level Models to Aggregate Evidence [0.0]
Fresh is a method for incorporating population-level summary results into predictive models trained on patient-level data.<n>The method produces patient-level predictions from a re-calibrated model that matches a set of specified aggregate statistics for a target population.
arXiv Detail & Related papers (2026-05-15T17:50:11Z) - MedEqualizer: A Framework Investigating Bias in Synthetic Medical Data and Mitigation via Augmentation [8.526339099878962]
We assess the fairness of synthetic data generated by multiple generative adversarial network (GAN)-based models using the MIMIC-III dataset.<n>We introduce MedEqualizer, a model-agnostic augmentation framework that enriches the underrepresented subgroups prior to synthetic data generation.
arXiv Detail & Related papers (2025-11-02T19:16:50Z) - Improving the Generation and Evaluation of Synthetic Data for Downstream Medical Causal Inference [89.5628648718851]
Causal inference is essential for developing and evaluating medical interventions.<n>Real-world medical datasets are often difficult to access due to regulatory barriers.<n>We present STEAM: a novel method for generating Synthetic data for Treatment Effect Analysis in Medicine.
arXiv Detail & Related papers (2025-10-21T16:16:00Z) - A Survey on Tabular Data Generation: Utility, Alignment, Fidelity, Privacy, and Beyond [53.56796220109518]
Different use cases demand synthetic data to comply with different requirements to be useful in practice.<n>Four types of requirements are reviewed: utility of the synthetic data, alignment of the synthetic data with domain-specific knowledge, statistical fidelity of the synthetic data distribution compared to the real data distribution, and privacy-preserving capabilities.<n>We discuss future directions for the field, along with opportunities to improve the current evaluation methods.
arXiv Detail & Related papers (2025-03-07T21:47:11Z) - Reimagining Synthetic Tabular Data Generation through Data-Centric AI: A
Comprehensive Benchmark [56.8042116967334]
Synthetic data serves as an alternative in training machine learning models.
ensuring that synthetic data mirrors the complex nuances of real-world data is a challenging task.
This paper explores the potential of integrating data-centric AI techniques to guide the synthetic data generation process.
arXiv Detail & Related papers (2023-10-25T20:32:02Z) - Statistical properties and privacy guarantees of an original
distance-based fully synthetic data generation method [0.0]
This work shows the technical feasibility of generating publicly releasable synthetic data using a multi-step framework.
By successfully assessing the quality of data produced using a novel multi-step synthetic data generation framework, we showed the technical and conceptual soundness of the Open-CESP initiative.
arXiv Detail & Related papers (2023-10-10T12:29:57Z) - Synthetic data generation for a longitudinal cohort study -- Evaluation,
method extension and reproduction of published data analysis results [0.32593385688760446]
In the health sector, access to individual-level data is often challenging due to privacy concerns.
A promising alternative is the generation of fully synthetic data.
In this study, we use a state-of-the-art synthetic data generation method.
arXiv Detail & Related papers (2023-05-12T13:13:55Z) - Revisiting the Evaluation of Image Synthesis with GANs [55.72247435112475]
This study presents an empirical investigation into the evaluation of synthesis performance, with generative adversarial networks (GANs) as a representative of generative models.
In particular, we make in-depth analyses of various factors, including how to represent a data point in the representation space, how to calculate a fair distance using selected samples, and how many instances to use from each set.
arXiv Detail & Related papers (2023-04-04T17:54:32Z) - Evaluation of the Synthetic Electronic Health Records [3.255030588361125]
This work outlines two metrics called Similarity and Uniqueness for sample-wise assessment of synthetic datasets.
We demonstrate the proposed notions with several state-of-the-art generative models to synthesise Cystic Fibrosis (CF) patients' electronic health records.
arXiv Detail & Related papers (2022-10-16T22:46:08Z) - Detection and Evaluation of Clusters within Sequential Data [58.720142291102135]
Clustering algorithms for Block Markov Chains possess theoretical optimality guarantees.
In particular, our sequential data is derived from human DNA, written text, animal movement data and financial markets.
It is found that the Block Markov Chain model assumption can indeed produce meaningful insights in exploratory data analyses.
arXiv Detail & Related papers (2022-10-04T15:22:39Z) - CDEvalSumm: An Empirical Study of Cross-Dataset Evaluation for Neural
Summarization Systems [121.78477833009671]
We investigate the performance of different summarization models under a cross-dataset setting.
A comprehensive study of 11 representative summarization systems on 5 datasets from different domains reveals the effect of model architectures and generation ways.
arXiv Detail & Related papers (2020-10-11T02:19:15Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.