VRXU-net: A Deep Learning Approach for Brain Ischemic Stroke Lesion Detection and Segmentation in T1W MRI
- URL: http://arxiv.org/abs/2605.21633v1
- Date: Wed, 20 May 2026 18:44:08 GMT
- Title: VRXU-net: A Deep Learning Approach for Brain Ischemic Stroke Lesion Detection and Segmentation in T1W MRI
- Abstract summary: This study introduces a novel VRU-Net architecture, derived from visual features, residual connections, and a U-shaped network, for detecting and segmenting ischemic stroke lesions in 3D magnetic resonance imaging scans.<n>To improve both performance and processing speed, a high-performance classifier is applied before the segmentation model in a sequential framework.<n>The proposed model is trained on the Anatomical Tracings of Lesions After Stroke dataset and outperforms state-of-the-art models in terms of accuracy and Dice coefficient.
- Score: 0.0
- License: http://creativecommons.org/licenses/by-sa/4.0/
- Abstract: When the blood supply to the brain is obstructed by a clot, oxygen delivery to brain tissues becomes insufficient, leading to cellular necrosis. In healthcare settings, accurately identifying and delineating ischemic lesion boundaries is essential for treatment and surgical planning. However, ischemic stroke lesions vary widely in shape, size, and location, and in grayscale MRI modalities such as T1W they may resemble surrounding brain structures. This makes lesion detection and segmentation a challenging task for clinicians. This study introduces a novel VRU-Net architecture, derived from visual features, residual connections, and a U-shaped network, for detecting and segmenting ischemic stroke lesions in 3D magnetic resonance imaging scans. The proposed method first uses a modified VGG model to identify ischemic stroke in separate 2D slices. Then, a U-shaped segmentation model with residual blocks segments the lesion in each slice. This procedure is applied independently to the axial, sagittal, and coronal planes, and the final output is generated by aggregating the three segmentation results. To improve both performance and processing speed, a high-performance classifier is applied before the segmentation model in a sequential framework. This strategy reduces unnecessary segmentation of non-lesion slices and improves overall accuracy. In addition, decomposing 3D images into 2D slices reduces model complexity while allowing information from three anatomical planes to support more accurate lesion localization. The proposed model is trained on the Anatomical Tracings of Lesions After Stroke dataset and outperforms state-of-the-art models in terms of accuracy and Dice coefficient. Moreover, the segmentation output provides feedback that helps the classification model reduce false-positive predictions.
Related papers
- D3Seg: Dependency-Aware Diffusion for Brain Tumor Segmentation with Missing Modalities [54.87947751720332]
We propose a novel segmentation model D3Seg to maintain stable performance under missing-modality settings.<n>The proposed model achieves approximately 1.5-2.0% Dice improvement on enhancing tumor (ET) and around 1.0% on tumor core (TC) across multiple missing modality configurations.
arXiv Detail & Related papers (2026-05-21T09:55:42Z) - Degradation-Aware Blur-Segmentation of Brain Tumor [6.772154747032075]
Degradation-Aware Blur-Segmentation Net (DABSeg) is a synchronous deblurring 3D multimodal MRI segmentation network.<n>We propose a feature-domain motion-deblurring stem to compensate for blur and rebalance intensity.<n>System embeds a blur-aware cross-modal cross-attention module and multi-scale residual aggregation to yield effective modality complementarity.
arXiv Detail & Related papers (2026-05-15T06:47:37Z) - Landmark-Free Preoperative-to-Intraoperative Registration in Laparoscopic Liver Resection [50.388465935739376]
Liver registration by overlaying preoperative 3D models onto intraoperative 2D frames can assist surgeons in perceiving the spatial anatomy of the liver clearly for a higher surgical success rate.<n>Existing registration methods rely heavily on anatomical landmark-based, which encounter two major limitations.<n>We propose a landmark-free preoperative-to-intraoperative registration framework utilizing effective self-supervised learning.
arXiv Detail & Related papers (2025-04-21T14:55:57Z) - On the Localization of Ultrasound Image Slices within Point Distribution
Models [84.27083443424408]
Thyroid disorders are most commonly diagnosed using high-resolution Ultrasound (US)
Longitudinal tracking is a pivotal diagnostic protocol for monitoring changes in pathological thyroid morphology.
We present a framework for automated US image slice localization within a 3D shape representation.
arXiv Detail & Related papers (2023-09-01T10:10:46Z) - Diffusion Models for Counterfactual Generation and Anomaly Detection in Brain Images [39.94162291765236]
We present a weakly supervised method to generate a healthy version of a diseased image and then use it to obtain a pixel-wise anomaly map.
We employ a diffusion model trained on healthy samples and combine Denoising Diffusion Probabilistic Model (DDPM) and Denoising Implicit Model (DDIM) at each step of the sampling process.
arXiv Detail & Related papers (2023-08-03T21:56:50Z) - Meta-Analysis of Transfer Learning for Segmentation of Brain Lesions [0.0]
Manual segmentation of stroke lesions from 3D magnetic resonance (MR) imaging volumes, the current gold standard, is not only very time-consuming, but its accuracy highly depends on the operator's experience.
We have implemented and tested a fully automatic method for stroke lesion segmentation using eight different 2D-model architectures trained via transfer learning (TL) and mixed data approaches.
Cross-validation results indicate that our new method can efficiently and automatically segment lesions fast and with high accuracy compared to ground truth.
arXiv Detail & Related papers (2023-06-20T17:42:30Z) - Deep learning network to correct axial and coronal eye motion in 3D OCT
retinal imaging [65.47834983591957]
We propose deep learning based neural networks to correct axial and coronal motion artifacts in OCT based on a single scan.
The experimental result shows that the proposed method can effectively correct motion artifacts and achieve smaller error than other methods.
arXiv Detail & Related papers (2023-05-27T03:55:19Z) - Whole-Body Lesion Segmentation in 18F-FDG PET/CT [11.662584140924725]
The proposed model is designed on the basis of the joint 2D and 3D nnUNET architecture to predict lesions across the whole body.
We evaluate the proposed method in the context of AutoPet Challenge, which measures the lesion segmentation performance in the metrics of dice score, false-positive volume and false-negative volume.
arXiv Detail & Related papers (2022-09-16T10:49:53Z) - A unified 3D framework for Organs at Risk Localization and Segmentation
for Radiation Therapy Planning [56.52933974838905]
Current medical workflow requires manual delineation of organs-at-risk (OAR)
In this work, we aim to introduce a unified 3D pipeline for OAR localization-segmentation.
Our proposed framework fully enables the exploitation of 3D context information inherent in medical imaging.
arXiv Detail & Related papers (2022-03-01T17:08:41Z) - Multiple Sclerosis Lesions Segmentation using Attention-Based CNNs in
FLAIR Images [0.2578242050187029]
Multiple Sclerosis (MS) is an autoimmune, and demyelinating disease that leads to lesions in the central nervous system.
Up to now a multitude of multimodality automatic biomedical approaches is used to segment lesions.
Authors propose a method employing just one modality (FLAIR image) to segment MS lesions accurately.
arXiv Detail & Related papers (2022-01-05T21:37:43Z) - Explainable multiple abnormality classification of chest CT volumes with
AxialNet and HiResCAM [89.2175350956813]
We introduce the challenging new task of explainable multiple abnormality classification in volumetric medical images.
We propose a multiple instance learning convolutional neural network, AxialNet, that allows identification of top slices for each abnormality.
We then aim to improve the model's learning through a novel mask loss that leverages HiResCAM and 3D allowed regions.
arXiv Detail & Related papers (2021-11-24T01:14:33Z) - Assignment Flow for Order-Constrained OCT Segmentation [0.0]
The identification of retinal layer thicknesses serves as an essential task be done for each patient separately.
The elaboration of automated segmentation models has become an important task in the field of medical image processing.
We propose a novel, purely data driven textitgeometric approach to order-constrained 3D OCT retinal cell layer segmentation
arXiv Detail & Related papers (2020-09-10T01:57:53Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.