StainNet: a fast and robust stain normalization network
- URL: http://arxiv.org/abs/2012.12535v5
- Date: Sat, 16 Jan 2021 05:26:38 GMT
- Title: StainNet: a fast and robust stain normalization network
- Authors: Hongtao Kang, Die Luo, Weihua Feng, Junbo Hu, Shaoqun Zeng, Tingwei
Quan, and Xiuli Liu
- Abstract summary: This paper proposes a fast and robust stain normalization network with only 1.28K parameters named StainNet.
The proposed method performs well in stain normalization and achieves a better accuracy and image quality.
- Score: 0.7796684624647288
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Due to a variety of factors, pathological images have large color
variabilities, which hamper the performance of computer-aided diagnosis (CAD)
systems. Stain normalization has been used to reduce the color variability and
increase the accuracy of CAD systems. Among them, the conventional methods
perform stain normalization on a pixel-by-pixel basis, but estimate stain
parameters just relying on one single reference image and thus would incur some
inaccurate normalization results. As for the current deep learning-based
methods, it can automatically extract the color distribution and need not pick
a representative reference image. While the deep learning-based methods have a
complex structure with millions of parameters, and a relatively low
computational efficiency and a risk to introduce artifacts. In this paper, a
fast and robust stain normalization network with only 1.28K parameters named
StainNet is proposed. StainNet can learn the color mapping relationship from a
whole dataset and adjust the color value in a pixel-to-pixel manner. The
proposed method performs well in stain normalization and achieves a better
accuracy and image quality. Application results show the cervical cytology
classification achieved a higher accuracy when after stain normalization of
StainNet.
Related papers
- Deep Learning Based Speckle Filtering for Polarimetric SAR Images. Application to Sentinel-1 [51.404644401997736]
We propose a complete framework to remove speckle in polarimetric SAR images using a convolutional neural network.
Experiments show that the proposed approach offers exceptional results in both speckle reduction and resolution preservation.
arXiv Detail & Related papers (2024-08-28T10:07:17Z) - Multi-target stain normalization for histology slides [6.820595748010971]
We introduce a novel approach that leverages multiple reference images to enhance robustness against stain variation.
Our method is parameter-free and can be adopted in existing computational pathology pipelines with no significant changes.
arXiv Detail & Related papers (2024-06-04T07:57:34Z) - StainFuser: Controlling Diffusion for Faster Neural Style Transfer in Multi-Gigapixel Histology Images [5.382682403111961]
Stain normalization algorithms aim to transform the color and intensity characteristics of a source multi-gigapixel histology image to match those of a target image.
We propose a new approach, StainFuser, which treats this problem as a style transfer task using a novel Conditional Latent Diffusion architecture.
arXiv Detail & Related papers (2024-03-14T11:49:43Z) - DARC: Distribution-Aware Re-Coloring Model for Generalizable Nucleus
Segmentation [68.43628183890007]
We argue that domain gaps can also be caused by different foreground (nucleus)-background ratios.
First, we introduce a re-coloring method that relieves dramatic image color variations between different domains.
Second, we propose a new instance normalization method that is robust to the variation in the foreground-background ratios.
arXiv Detail & Related papers (2023-09-01T01:01:13Z) - Probabilistic Deep Metric Learning for Hyperspectral Image
Classification [91.5747859691553]
This paper proposes a probabilistic deep metric learning framework for hyperspectral image classification.
It aims to predict the category of each pixel for an image captured by hyperspectral sensors.
Our framework can be readily applied to existing hyperspectral image classification methods.
arXiv Detail & Related papers (2022-11-15T17:57:12Z) - Stain-invariant self supervised learning for histopathology image
analysis [74.98663573628743]
We present a self-supervised algorithm for several classification tasks within hematoxylin and eosin stained images of breast cancer.
Our method achieves the state-of-the-art performance on several publicly available breast cancer datasets.
arXiv Detail & Related papers (2022-11-14T18:16:36Z) - Ultra-high-resolution unpaired stain transformation via Kernelized
Instance Normalization [1.2234742322758418]
We propose a strategy for ultra-high-resolution unpaired image-to-image translation: Kernelized Instance Normalization (KIN)
KIN preserves local information and successfully achieves seamless stain transformation with constant GPU memory usage.
This is the first successful study for the ultra-high-resolution unpaired image-to-image translation with constant space complexity.
arXiv Detail & Related papers (2022-08-23T04:47:43Z) - Detecting Recolored Image by Spatial Correlation [60.08643417333974]
Image recoloring is an emerging editing technique that can manipulate the color values of an image to give it a new style.
In this paper, we explore a solution from the perspective of the spatial correlation, which exhibits the generic detection capability for both conventional and deep learning-based recoloring.
Our method achieves the state-of-the-art detection accuracy on multiple benchmark datasets and exhibits well generalization for unknown types of recoloring methods.
arXiv Detail & Related papers (2022-04-23T01:54:06Z) - Texture Characterization of Histopathologic Images Using Ecological
Diversity Measures and Discrete Wavelet Transform [82.53597363161228]
This paper proposes a method for characterizing texture across histopathologic images with a considerable success rate.
It is possible to quantify the intrinsic properties of such images with promising accuracy on two HI datasets.
arXiv Detail & Related papers (2022-02-27T02:19:09Z) - Stain Normalized Breast Histopathology Image Recognition using
Convolutional Neural Networks for Cancer Detection [9.826027427965354]
Recent advances have shown that the convolutional Neural Network (CNN) architectures can be used to design a Computer Aided Diagnostic (CAD) System for breast cancer detection.
We consider some contemporary CNN models for binary classification of breast histopathology images.
We have validated the trained CNN networks on a publicly available BreaKHis dataset, for 200x and 400x magnified histopathology images.
arXiv Detail & Related papers (2022-01-04T03:09:40Z) - Fast, Self Supervised, Fully Convolutional Color Normalization of H&E
Stained Images [3.1329883315045106]
Color variation causes problems for the deployment of deep learning-based solutions for automatic diagnosis system in histopathology.
We propose a color normalization technique, which is fast during its self-supervised training as well as inference.
Our method is based on a lightweight fully-convolutional neural network and can be easily attached to a deep learning-based pipeline as a pre-processing block.
arXiv Detail & Related papers (2020-11-30T17:05:58Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.