Pulmonary Fissure Segmentation in CT Images Based on ODoS Filter and
Shape Features
- URL: http://arxiv.org/abs/2201.09163v1
- Date: Sun, 23 Jan 2022 02:43:03 GMT
- Title: Pulmonary Fissure Segmentation in CT Images Based on ODoS Filter and
Shape Features
- Authors: Yuanyuan Peng, Pengpeng Luan, Hongbin Tu, Xiong Li, Ping Zhou
- Abstract summary: We adopt an ODoS filter by merging the orientation information and magnitude information to highlight structure features for fissure enhancement.
Considering the shape difference between pulmonary fissures and tubular structures in magnitude field, a shape measure approach and a 3D skeletonization model are combined to segment pulmonary fissures for clutters removal.
- Score: 3.7006330637320897
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Priori knowledge of pulmonary anatomy plays a vital role in diagnosis of lung
diseases. In CT images, pulmonary fissure segmentation is a formidable mission
due to various of factors. To address the challenge, an useful approach based
on ODoS filter and shape features is presented for pulmonary fissure
segmentation. Here, we adopt an ODoS filter by merging the orientation
information and magnitude information to highlight structure features for
fissure enhancement, which can effectively distinguish between pulmonary
fissures and clutters. Motivated by the fact that pulmonary fissures appear as
linear structures in 2D space and planar structures in 3D space in orientation
field, an orientation curvature criterion and an orientation partition scheme
are fused to separate fissure patches and other structures in different
orientation partition, which can suppress parts of clutters. Considering the
shape difference between pulmonary fissures and tubular structures in magnitude
field, a shape measure approach and a 3D skeletonization model are combined to
segment pulmonary fissures for clutters removal. When applying our scheme to 55
chest CT scans which acquired from a publicly available LOLA11 datasets, the
median F1-score, False Discovery Rate (FDR), and False Negative Rate (FNR)
respectively are 0.896, 0.109, and 0.100, which indicates that the presented
method has a satisfactory pulmonary fissure segmentation performance.
Related papers
- Robust deep labeling of radiological emphysema subtypes using squeeze
and excitation convolutional neural networks: The MESA Lung and SPIROMICS
Studies [34.200556207264974]
Pulmonary emphysema is the progressive, irreversible loss of lung tissue.
Recent work has led to the unsupervised learning of ten spatially-informed lung texture patterns (ss) on lung CT.
We present a robust 3-D squeeze-and-excitation model for supervised classification of ss CNNs and CTES on lung CT.
arXiv Detail & Related papers (2024-03-01T03:45:56Z) - Automatic lobe segmentation using attentive cross entropy and end-to-end
fissure generation [6.0255364788259165]
We propose a new automatic lung lobe segmentation framework, which pays attention to the area around the pulmonary fissure during the training process.
We also introduce an end-to-end pulmonary fissure generation method in the auxiliary pulmonary fissure segmentation task.
We achieve 97.83% and 94.75% dice scores on our private dataset STLB and public LUNA16 dataset respectively.
arXiv Detail & Related papers (2023-07-24T09:16:05Z) - Accurate Fine-Grained Segmentation of Human Anatomy in Radiographs via
Volumetric Pseudo-Labeling [66.75096111651062]
We created a large-scale dataset of 10,021 thoracic CTs with 157 labels.
We applied an ensemble of 3D anatomy segmentation models to extract anatomical pseudo-labels.
Our resulting segmentation models demonstrated remarkable performance on CXR.
arXiv Detail & Related papers (2023-06-06T18:01:08Z) - An Efficient and Robust Method for Chest X-Ray Rib Suppression that
Improves Pulmonary Abnormality Diagnosis [0.49998148477760956]
Suppression of thoracic bone shadows on chest X-rays (CXRs) has been indicated to improve the diagnosis of pulmonary disease.
Previous approaches can be categorized as unsupervised physical and supervised deep learning models.
We propose a generalizable yet efficient workflow of two stages: (1) training pairs generation with GT bone shadows eliminated in minimization by a physical model in spatially transformed gradient fields.
(2) fully supervised image denoising network training on stage-one datasets for fast rib removal on incoming CXRs.
arXiv Detail & Related papers (2023-02-19T23:47:02Z) - What Makes for Automatic Reconstruction of Pulmonary Segments [50.216231776343115]
3D reconstruction of pulmonary segments plays an important role in surgical treatment planning of lung cancer.
However, automatic reconstruction of pulmonary segments remains unexplored in the era of deep learning.
We propose ImPulSe, a deep implicit surface model designed for pulmonary segment reconstruction.
arXiv Detail & Related papers (2022-07-07T04:24:17Z) - BronchusNet: Region and Structure Prior Embedded Representation Learning
for Bronchus Segmentation and Classification [53.53758990624962]
We propose a region and structure prior embedded framework named BronchusNet to achieve accurate bronchial analysis.
For bronchus segmentation, we propose an adaptive hard region-aware UNet that incorporates multi-level prior guidance of hard pixel-wise samples.
For the classification of bronchial branches, we propose a hybrid point-voxel graph learning module.
arXiv Detail & Related papers (2022-05-14T02:32:33Z) - Pulmonary Vessel Segmentation based on Orthogonal Fused U-Net++ of Chest
CT Images [1.8692254863855962]
We present an effective framework and refinement process of pulmonary vessel segmentation from chest computed tomographic (CT) images.
The key to our approach is a 2.5D segmentation network applied from three axes, which presents a robust and fully automated pulmonary vessel segmentation result.
Our method outperforms other network structures by a large margin and achieves by far the highest average DICE score of 0.9272 and precision of 0.9310.
arXiv Detail & Related papers (2021-07-03T21:46:29Z) - CoRSAI: A System for Robust Interpretation of CT Scans of COVID-19
Patients Using Deep Learning [133.87426554801252]
We adopted an approach based on using an ensemble of deep convolutionalneural networks for segmentation of lung CT scans.
Using our models we are able to segment the lesions, evaluatepatients dynamics, estimate relative volume of lungs affected by lesions and evaluate the lung damage stage.
arXiv Detail & Related papers (2021-05-25T12:06:55Z) - Contralaterally Enhanced Networks for Thoracic Disease Detection [120.60868136876599]
There exist many similar structures in the left and right parts of the chest, such as ribs, lung fields and bronchial tubes.
This kind of similarities can be used to identify diseases in chest X-rays, according to the experience of broad-certificated radiologists.
We propose a deep end-to-end module to exploit the contralateral context information for enhancing feature representations of disease proposals.
arXiv Detail & Related papers (2020-10-09T10:15:26Z) - M3Lung-Sys: A Deep Learning System for Multi-Class Lung Pneumonia
Screening from CT Imaging [85.00066186644466]
We propose a Multi-task Multi-slice Deep Learning System (M3Lung-Sys) for multi-class lung pneumonia screening from CT imaging.
In addition to distinguish COVID-19 from Healthy, H1N1, and CAP cases, our M 3 Lung-Sys also be able to locate the areas of relevant lesions.
arXiv Detail & Related papers (2020-10-07T06:22:24Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.