Task-oriented Self-supervised Learning for Anomaly Detection in
Electroencephalography
- URL: http://arxiv.org/abs/2207.01391v1
- Date: Mon, 4 Jul 2022 13:15:08 GMT
- Title: Task-oriented Self-supervised Learning for Anomaly Detection in
Electroencephalography
- Authors: Yaojia Zheng, Zhouwu Liu, Rong Mo, Ziyi Chen, Wei-shi Zheng, and
Ruixuan Wang
- Abstract summary: A task-oriented self-supervised learning approach is proposed to train a more effective anomaly detector.
A specific two branch convolutional neural network with larger kernels is designed as the feature extractor.
The effectively designed and trained feature extractor has shown to be able to extract better feature representations from EEGs.
- Score: 51.45515911920534
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Accurate automated analysis of electroencephalography (EEG) would largely
help clinicians effectively monitor and diagnose patients with various brain
diseases. Compared to supervised learning with labelled disease EEG data which
can train a model to analyze specific diseases but would fail to monitor
previously unseen statuses, anomaly detection based on only normal EEGs can
detect any potential anomaly in new EEGs. Different from existing anomaly
detection strategies which do not consider any property of unavailable abnormal
data during model development, a task-oriented self-supervised learning
approach is proposed here which makes use of available normal EEGs and expert
knowledge about abnormal EEGs to train a more effective feature extractor for
the subsequent development of anomaly detector. In addition, a specific two
branch convolutional neural network with larger kernels is designed as the
feature extractor such that it can more easily extract both larger scale and
small-scale features which often appear in unavailable abnormal EEGs. The
effectively designed and trained feature extractor has shown to be able to
extract better feature representations from EEGs for development of anomaly
detector based on normal data and future anomaly detection for new EEGs, as
demonstrated on three EEG datasets. The code is available at
https://github.com/ironing/EEG-AD.
Related papers
- hvEEGNet: exploiting hierarchical VAEs on EEG data for neuroscience
applications [3.031375888004876]
Two main issues challenge the existing DL-based modeling methods for EEG.
High variability between subjects and low signal-to-noise ratio make it difficult to ensure a good quality in the EEG data.
We propose two variational autoencoder models, namely vEEGNet-ver3 and hvEEGNet, to target the problem of high-fidelity EEG reconstruction.
arXiv Detail & Related papers (2023-11-20T15:36:31Z) - Unsupervised Multivariate Time-Series Transformers for Seizure
Identification on EEG [9.338549413542948]
Epileptic seizures are commonly monitored through electroencephalogram (EEG) recordings.
We present an unsupervised transformer-based model for seizure identification on raw EEG.
We train an autoencoder involving a transformer encoder via an unsupervised loss function, incorporating a novel masking strategy.
arXiv Detail & Related papers (2023-01-03T15:57:13Z) - Prototypical Residual Networks for Anomaly Detection and Localization [80.5730594002466]
We propose a framework called Prototypical Residual Network (PRN)
PRN learns feature residuals of varying scales and sizes between anomalous and normal patterns to accurately reconstruct the segmentation maps of anomalous regions.
We present a variety of anomaly generation strategies that consider both seen and unseen appearance variance to enlarge and diversify anomalies.
arXiv Detail & Related papers (2022-12-05T05:03:46Z) - fMRI from EEG is only Deep Learning away: the use of interpretable DL to
unravel EEG-fMRI relationships [68.8204255655161]
We present an interpretable domain grounded solution to recover the activity of several subcortical regions from multichannel EEG data.
We recover individual spatial and time-frequency patterns of scalp EEG predictive of the hemodynamic signal in the subcortical nuclei.
arXiv Detail & Related papers (2022-10-23T15:11:37Z) - StRegA: Unsupervised Anomaly Detection in Brain MRIs using a Compact
Context-encoding Variational Autoencoder [48.2010192865749]
Unsupervised anomaly detection (UAD) can learn a data distribution from an unlabelled dataset of healthy subjects and then be applied to detect out of distribution samples.
This research proposes a compact version of the "context-encoding" VAE (ceVAE) model, combined with pre and post-processing steps, creating a UAD pipeline (StRegA)
The proposed pipeline achieved a Dice score of 0.642$pm$0.101 while detecting tumours in T2w images of the BraTS dataset and 0.859$pm$0.112 while detecting artificially induced anomalies.
arXiv Detail & Related papers (2022-01-31T14:27:35Z) - High Frequency EEG Artifact Detection with Uncertainty via Early Exit
Paradigm [70.50499513259322]
Current artifact detection pipelines are resource-hungry and rely heavily on hand-crafted features.
We propose E4G, a deep learning framework for high frequency EEG artifact detection.
Our framework exploits the early exit paradigm, building an implicit ensemble of models capable of capturing uncertainty.
arXiv Detail & Related papers (2021-07-21T07:05:42Z) - Automated Detection of Abnormal EEGs in Epilepsy With a Compact and
Efficient CNN Model [9.152759278163954]
This paper describes the development of a novel class of compact and efficient convolutional neural networks (CNNs) for detecting abnormal time intervals and electrodes in EEGs for epilepsy.
Unlike the EEGNet, the proposed model, mEEGNet, has the same number of electrode inputs and outputs to detect abnormalities.
Results showed that the mEEGNet detected abnormal EEGs with the area under the curve, F1-values, and sensitivity equivalent to or higher than those of existing CNNs.
arXiv Detail & Related papers (2021-05-21T16:52:56Z) - EEG-GCNN: Augmenting Electroencephalogram-based Neurological Disease
Diagnosis using a Domain-guided Graph Convolutional Neural Network [0.21756081703275995]
This paper presents a novel graph convolutional neural network (GCNN)-based approach for improving the diagnosis of neurological diseases using scalp-electroencephalograms (EEGs)
We present EEG-GCNN, a novel GCNN model for EEG data that captures both the spatial and functional connectivity between the scalp electrodes.
We demonstrate that EEG-GCNN significantly outperforms the human baseline and classical machine learning (ML) baselines, with an AUC of 0.90.
arXiv Detail & Related papers (2020-11-17T20:25:28Z) - Unsupervised 3D Brain Anomaly Detection [0.0]
Anomaly detection (AD) is the identification of data samples that do not fit a learned data distribution.
Deep generative models, such as Generative Adrial Networks (GANs), can be exploited to capture anatomical variability.
This study exemplifies the first AD approach that can efficiently handle volumetric data and detect 3D brain anomalies in one model.
arXiv Detail & Related papers (2020-10-09T17:59:17Z) - A Novel Transferability Attention Neural Network Model for EEG Emotion
Recognition [51.203579838210885]
We propose a transferable attention neural network (TANN) for EEG emotion recognition.
TANN learns the emotional discriminative information by highlighting the transferable EEG brain regions data and samples adaptively.
This can be implemented by measuring the outputs of multiple brain-region-level discriminators and one single sample-level discriminator.
arXiv Detail & Related papers (2020-09-21T02:42:30Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.