Airway Label Prediction in Video Bronchoscopy: Capturing Temporal
Dependencies Utilizing Anatomical Knowledge
- URL: http://arxiv.org/abs/2307.08318v1
- Date: Mon, 17 Jul 2023 08:26:36 GMT
- Title: Airway Label Prediction in Video Bronchoscopy: Capturing Temporal
Dependencies Utilizing Anatomical Knowledge
- Authors: Ron Keuth, Mattias Heinrich, Martin Eichenlaub and Marian Himstedt
- Abstract summary: This paper addresses navigation guidance solely incorporating bronchosopy video data.
We take maximally advantage of anatomical constraints of airway trees being sequentially traversed.
We are able to improve the accuracy up to to 0.98 compared to 0.81 for a classification based on individual frames.
- Score: 0.0
- License: http://creativecommons.org/licenses/by-nc-sa/4.0/
- Abstract: Purpose: Navigation guidance is a key requirement for a multitude of lung
interventions using video bronchoscopy. State-of-the-art solutions focus on
lung biopsies using electromagnetic tracking and intraoperative image
registration w.r.t. preoperative CT scans for guidance. The requirement of
patient-specific CT scans hampers the utilisation of navigation guidance for
other applications such as intensive care units.
Methods: This paper addresses navigation guidance solely incorporating
bronchosopy video data. In contrast to state-of-the-art approaches we entirely
omit the use of electromagnetic tracking and patient-specific CT scans.
Guidance is enabled by means of topological bronchoscope localization w.r.t. an
interpatient airway model. Particularly, we take maximally advantage of
anatomical constraints of airway trees being sequentially traversed. This is
realized by incorporating sequences of CNN-based airway likelihoods into a
Hidden Markov Model.
Results: Our approach is evaluated based on multiple experiments inside a
lung phantom model. With the consideration of temporal context and use of
anatomical knowledge for regularization, we are able to improve the accuracy up
to to 0.98 compared to 0.81 (weighted F1: 0.98 compared to 0.81) for a
classification based on individual frames.
Conclusion: We combine CNN-based single image classification of airway
segments with anatomical constraints and temporal HMM-based inference for the
first time. Our approach renders vision-only guidance for bronchoscopy
interventions in the absence of electromagnetic tracking and patient-specific
CT scans possible.
Related papers
- PANS: Probabilistic Airway Navigation System for Real-time Robust Bronchoscope Localization [4.755280006199144]
We propose a novel Probabilistic Airway Navigation System (PANS) for bronchoscope localization.
Our PANS incorporates diverse visual representations by leveraging two key modules, including the Depth-based Motion Inference (DMI) and the Bronchial Semantic Analysis (BSA)
Under this probabilistic formulation, our PANS is capable of achieving the 6-DOF bronchoscope localization with superior accuracy and robustness.
arXiv Detail & Related papers (2024-07-08T02:13:41Z) - Lung-CADex: Fully automatic Zero-Shot Detection and Classification of Lung Nodules in Thoracic CT Images [45.29301790646322]
Computer-aided diagnosis can help with early lung nodul detection and facilitate subsequent nodule characterization.
We propose CADe, for segmenting lung nodules in a zero-shot manner using a variant of the Segment Anything Model called MedSAM.
We also propose, CADx, a method for the nodule characterization as benign/malignant by making a gallery of radiomic features and aligning image-feature pairs through contrastive learning.
arXiv Detail & Related papers (2024-07-02T19:30:25Z) - Class-Aware Cartilage Segmentation for Autonomous US-CT Registration in Robotic Intercostal Ultrasound Imaging [39.597735935731386]
A class-aware cartilage bone segmentation network with geometry-constraint post-processing is presented to capture patient-specific rib skeletons.
A dense skeleton graph-based non-rigid registration is presented to map the intercostal scanning path from a generic template to individual patients.
Results demonstrate that the proposed graph-based registration method can robustly and precisely map the path from CT template to individual patients.
arXiv Detail & Related papers (2024-06-06T14:15:15Z) - Real-time guidewire tracking and segmentation in intraoperative x-ray [52.51797358201872]
We propose a two-stage deep learning framework for real-time guidewire segmentation and tracking.
In the first stage, a Yolov5 detector is trained, using the original X-ray images as well as synthetic ones, to output the bounding boxes of possible target guidewires.
In the second stage, a novel and efficient network is proposed to segment the guidewire in each detected bounding box.
arXiv Detail & Related papers (2024-04-12T20:39:19Z) - CathFlow: Self-Supervised Segmentation of Catheters in Interventional Ultrasound Using Optical Flow and Transformers [66.15847237150909]
We introduce a self-supervised deep learning architecture to segment catheters in longitudinal ultrasound images.
The network architecture builds upon AiAReSeg, a segmentation transformer built with the Attention in Attention mechanism.
We validated our model on a test dataset, consisting of unseen synthetic data and images collected from silicon aorta phantoms.
arXiv Detail & Related papers (2024-03-21T15:13:36Z) - Live image-based neurosurgical guidance and roadmap generation using
unsupervised embedding [53.992124594124896]
We present a method for live image-only guidance leveraging a large data set of annotated neurosurgical videos.
A generated roadmap encodes the common anatomical paths taken in surgeries in the training set.
We trained and evaluated the proposed method with a data set of 166 transsphenoidal adenomectomy procedures.
arXiv Detail & Related papers (2023-03-31T12:52:24Z) - Weakly Supervised Airway Orifice Segmentation in Video Bronchoscopy [0.0]
This paper addresses the automatic segmentation of bronchial orifices in bronchoscopy videos.
Deep learning-based approaches to this task are currently hampered due to the lack of readily-available ground truth segmentation data.
We present a data-driven pipeline consisting of a k-means followed by a compact marker-based watershed algorithm.
arXiv Detail & Related papers (2022-08-24T12:18:25Z) - Preservation of High Frequency Content for Deep Learning-Based Medical
Image Classification [74.84221280249876]
An efficient analysis of large amounts of chest radiographs can aid physicians and radiologists.
We propose a novel Discrete Wavelet Transform (DWT)-based method for the efficient identification and encoding of visual information.
arXiv Detail & Related papers (2022-05-08T15:29:54Z) - Improving Classification Model Performance on Chest X-Rays through Lung
Segmentation [63.45024974079371]
We propose a deep learning approach to enhance abnormal chest x-ray (CXR) identification performance through segmentations.
Our approach is designed in a cascaded manner and incorporates two modules: a deep neural network with criss-cross attention modules (XLSor) for localizing lung region in CXR images and a CXR classification model with a backbone of a self-supervised momentum contrast (MoCo) model pre-trained on large-scale CXR data sets.
arXiv Detail & Related papers (2022-02-22T15:24:06Z) - CoRSAI: A System for Robust Interpretation of CT Scans of COVID-19
Patients Using Deep Learning [133.87426554801252]
We adopted an approach based on using an ensemble of deep convolutionalneural networks for segmentation of lung CT scans.
Using our models we are able to segment the lesions, evaluatepatients dynamics, estimate relative volume of lungs affected by lesions and evaluate the lung damage stage.
arXiv Detail & Related papers (2021-05-25T12:06:55Z) - Pulmonary embolism identification in computerized tomography pulmonary
angiography scans with deep learning technologies in COVID-19 patients [0.65756807269289]
We present some of the most accurate and fast deep learning models for pulmonary embolism identification inA-Scans images, through classification and localization (object detection) approaches for patients infected by COVID-19.
We provide a fast-track solution (system) for the research community of the area, which combines both classification and object detection models for improving the precision of identifying pulmonary embolisms.
arXiv Detail & Related papers (2021-05-24T10:23:21Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.