A Probabilistic Neural Twin for Treatment Planning in Peripheral
Pulmonary Artery Stenosis
- URL: http://arxiv.org/abs/2312.00854v1
- Date: Fri, 1 Dec 2023 14:54:17 GMT
- Title: A Probabilistic Neural Twin for Treatment Planning in Peripheral
Pulmonary Artery Stenosis
- Authors: John D. Lee, Jakob Richter, Martin R. Pfaller, Jason M. Szafron,
Karthik Menon, Andrea Zanoni, Michael R. Ma, Jeffrey A. Feinstein, Jacqueline
Kreutzer, Alison L. Marsden and Daniele E. Schiavazzi
- Abstract summary: We discuss an application to the repair of multiple stenosis in peripheral pulmonary artery disease.
We formulate the problem in probability, and solve it through a sample-based approach.
We propose a new offline-online pipeline for probabilsitic real-time treatment planning.
- Score: 1.8116671390518397
- License: http://creativecommons.org/licenses/by-nc-nd/4.0/
- Abstract: The substantial computational cost of high-fidelity models in numerical
hemodynamics has, so far, relegated their use mainly to offline treatment
planning. New breakthroughs in data-driven architectures and optimization
techniques for fast surrogate modeling provide an exciting opportunity to
overcome these limitations, enabling the use of such technology for
time-critical decisions. We discuss an application to the repair of multiple
stenosis in peripheral pulmonary artery disease through either transcatheter
pulmonary artery rehabilitation or surgery, where it is of interest to achieve
desired pressures and flows at specific locations in the pulmonary artery tree,
while minimizing the risk for the patient. Since different degrees of success
can be achieved in practice during treatment, we formulate the problem in
probability, and solve it through a sample-based approach. We propose a new
offline-online pipeline for probabilsitic real-time treatment planning which
combines offline assimilation of boundary conditions, model reduction, and
training dataset generation with online estimation of marginal probabilities,
possibly conditioned on the degree of augmentation observed in already repaired
lesions. Moreover, we propose a new approach for the parametrization of
arbitrarily shaped vascular repairs through iterative corrections of a
zero-dimensional approximant. We demonstrate this pipeline for a diseased model
of the pulmonary artery tree available through the Vascular Model Repository.
Related papers
- Machine learning for cerebral blood vessels' malformations [38.524104108347764]
Cerebral aneurysms and arteriovenous malformations are life-threatening hemodynamic pathologies of the brain.
Parameters of cerebral blood flow could potentially be utilized in machine learning-assisted protocols for risk assessment and therapeutic prognosis.
arXiv Detail & Related papers (2024-11-25T12:58:00Z) - Deep State-Space Generative Model For Correlated Time-to-Event Predictions [54.3637600983898]
We propose a deep latent state-space generative model to capture the interactions among different types of correlated clinical events.
Our method also uncovers meaningful insights about the latent correlations among mortality and different types of organ failures.
arXiv Detail & Related papers (2024-07-28T02:42:36Z) - Reconstructing Blood Flow in Data-Poor Regimes: A Vasculature Network Kernel for Gaussian Process Regression [2.9998889086656586]
We introduce a novel methodology to reconstruct the kernel within the vascular network, which is a non-Euclidean space.
The proposed kernel encodes bothtemporal and vessel-to-vessel correlations, thus enabling blood flow reconstruction in vessels that lack direct measurements.
We demonstrate the performance of the model on three test cases, namely, a simple Y-shaped bifurcation, abdominal aorta, and the Circle of Willis in the brain.
arXiv Detail & Related papers (2024-03-14T15:41:15Z) - Prediction of Post-Operative Renal and Pulmonary Complications Using
Transformers [69.81176740997175]
We evaluate the performance of transformer-based models in predicting postoperative acute renal failure, pulmonary complications, and postoperative in-hospital mortality.
Our results demonstrate that transformer-based models can achieve superior performance in predicting postoperative complications and outperform traditional machine learning models.
arXiv Detail & Related papers (2023-06-01T14:08:05Z) - Estimating Optimal Infinite Horizon Dynamic Treatment Regimes via
pT-Learning [2.0625936401496237]
Recent advances in mobile health (mHealth) technology provide an effective way to monitor individuals' health statuses and deliver just-in-time personalized interventions.
The practical use of mHealth technology raises unique challenges to existing methodologies on learning an optimal dynamic treatment regime.
We propose a Proximal Temporal Learning framework to estimate an optimal regime adaptively adjusted between deterministic and sparse policy models.
arXiv Detail & Related papers (2021-10-20T18:38:22Z) - Deep Bayesian Estimation for Dynamic Treatment Regimes with a Long
Follow-up Time [28.11470886127216]
Causal effect estimation for dynamic treatment regimes (DTRs) contributes to sequential decision making.
We combine outcome regression models with treatment models for high dimensional features using uncensored subjects that are small in sample size.
Also, the developed deep Bayesian models can model uncertainty and output the prediction variance which is essential for the safety-aware applications, such as self-driving cars and medical treatment design.
arXiv Detail & Related papers (2021-09-20T13:21:39Z) - A Twin Neural Model for Uplift [59.38563723706796]
Uplift is a particular case of conditional treatment effect modeling.
We propose a new loss function defined by leveraging a connection with the Bayesian interpretation of the relative risk.
We show our proposed method is competitive with the state-of-the-art in simulation setting and on real data from large scale randomized experiments.
arXiv Detail & Related papers (2021-05-11T16:02:39Z) - DeepRite: Deep Recurrent Inverse TreatmEnt Weighting for Adjusting
Time-varying Confounding in Modern Longitudinal Observational Data [68.29870617697532]
We propose Deep Recurrent Inverse TreatmEnt weighting (DeepRite) for time-varying confounding in longitudinal data.
DeepRite is shown to recover the ground truth from synthetic data, and estimate unbiased treatment effects from real data.
arXiv Detail & Related papers (2020-10-28T15:05:08Z) - MIA-Prognosis: A Deep Learning Framework to Predict Therapy Response [58.0291320452122]
This paper aims at a unified deep learning approach to predict patient prognosis and therapy response.
We formalize the prognosis modeling as a multi-modal asynchronous time series classification task.
Our predictive model could further stratify low-risk and high-risk patients in terms of long-term survival.
arXiv Detail & Related papers (2020-10-08T15:30:17Z) - Geometric Uncertainty in Patient-Specific Cardiovascular Modeling with
Convolutional Dropout Networks [0.0]
We propose a novel approach to generate samples from the conditional distribution of patient-specific cardiovascular models.
Key innovation introduced in the proposed approach is the ability to learn geometric uncertainty directly from training data.
arXiv Detail & Related papers (2020-09-16T00:13:12Z) - Estimating Counterfactual Treatment Outcomes over Time Through
Adversarially Balanced Representations [114.16762407465427]
We introduce the Counterfactual Recurrent Network (CRN) to estimate treatment effects over time.
CRN uses domain adversarial training to build balancing representations of the patient history.
We show how our model achieves lower error in estimating counterfactuals and in choosing the correct treatment and timing of treatment.
arXiv Detail & Related papers (2020-02-10T20:47:36Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.