Quantitative perfusion maps using a novelty spatiotemporal convolutional
neural network
- URL: http://arxiv.org/abs/2312.05279v1
- Date: Fri, 8 Dec 2023 09:22:25 GMT
- Title: Quantitative perfusion maps using a novelty spatiotemporal convolutional
neural network
- Authors: Anbo Cao, Pin-Yu Le, Zhonghui Qie, Haseeb Hassan, Yingwei Guo, Asim
Zaman, Jiaxi Lu, Xueqiang Zeng, Huihui Yang, Xiaoqiang Miao, Taiyu Han,
Guangtao Huang, Yan Kang, Yu Luo and Jia Guo
- Abstract summary: This study presents a perfusion parameters estimation network that considers spatial and temporal information.
The results indicate that the network can accurately estimate perfusion parameters, including cerebral blood volume (CBV), cerebral blood flow (CBF), and time to maximum of the residual function (Tmax)
The proposed model also maintains time efficiency, closely approaching the performance of commercial gold-standard software.
- Score: 13.188103532542797
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Dynamic susceptibility contrast magnetic resonance imaging (DSC-MRI) is
widely used to evaluate acute ischemic stroke to distinguish salvageable tissue
and infarct core. For this purpose, traditional methods employ deconvolution
techniques, like singular value decomposition, which are known to be vulnerable
to noise, potentially distorting the derived perfusion parameters. However,
deep learning technology could leverage it, which can accurately estimate
clinical perfusion parameters compared to traditional clinical approaches.
Therefore, this study presents a perfusion parameters estimation network that
considers spatial and temporal information, the Spatiotemporal Network
(ST-Net), for the first time. The proposed network comprises a designed
physical loss function to enhance model performance further. The results
indicate that the network can accurately estimate perfusion parameters,
including cerebral blood volume (CBV), cerebral blood flow (CBF), and time to
maximum of the residual function (Tmax). The structural similarity index (SSIM)
mean values for CBV, CBF, and Tmax parameters were 0.952, 0.943, and 0.863,
respectively. The DICE score for the hypo-perfused region reached 0.859,
demonstrating high consistency. The proposed model also maintains time
efficiency, closely approaching the performance of commercial gold-standard
software.
Related papers
- Improving Machine Learning Based Sepsis Diagnosis Using Heart Rate Variability [0.0]
This study aims to use heart rate variability (HRV) features to develop an effective predictive model for sepsis detection.
A neural network model is trained on the HRV features, achieving an F1 score of 0.805, a precision of 0.851, and a recall of 0.763.
arXiv Detail & Related papers (2024-08-01T01:47:29Z) - Machine Learning for ALSFRS-R Score Prediction: Making Sense of the Sensor Data [44.99833362998488]
Amyotrophic Lateral Sclerosis (ALS) is a rapidly progressive neurodegenerative disease that presents individuals with limited treatment options.
The present investigation, spearheaded by the iDPP@CLEF 2024 challenge, focuses on utilizing sensor-derived data obtained through an app.
arXiv Detail & Related papers (2024-07-10T19:17:23Z) - Brain Imaging-to-Graph Generation using Adversarial Hierarchical Diffusion Models for MCI Causality Analysis [44.45598796591008]
Brain imaging-to-graph generation (BIGG) framework is proposed to map functional magnetic resonance imaging (fMRI) into effective connectivity for mild cognitive impairment analysis.
The hierarchical transformers in the generator are designed to estimate the noise at multiple scales.
Evaluations of the ADNI dataset demonstrate the feasibility and efficacy of the proposed model.
arXiv Detail & Related papers (2023-05-18T06:54:56Z) - Tissue Classification During Needle Insertion Using Self-Supervised
Contrastive Learning and Optical Coherence Tomography [53.38589633687604]
We propose a deep neural network that classifies the tissues from the phase and intensity data of complex OCT signals acquired at the needle tip.
We show that with 10% of the training set, our proposed pretraining strategy helps the model achieve an F1 score of 0.84 whereas the model achieves an F1 score of 0.60 without it.
arXiv Detail & Related papers (2023-04-26T14:11:04Z) - Continuous time recurrent neural networks: overview and application to
forecasting blood glucose in the intensive care unit [56.801856519460465]
Continuous time autoregressive recurrent neural networks (CTRNNs) are a deep learning model that account for irregular observations.
We demonstrate the application of these models to probabilistic forecasting of blood glucose in a critical care setting.
arXiv Detail & Related papers (2023-04-14T09:39:06Z) - Mesh Neural Networks for SE(3)-Equivariant Hemodynamics Estimation on the Artery Wall [13.113110989699571]
We consider the estimation of vector-valued quantities on the wall of three-dimensional geometric artery models.
We employ group equivariant graph convolution in an end-to-end SE(3)-equivariant neural network that operates directly on triangular surface meshes.
We show that our method is powerful enough to accurately predict transient, vector-valued WSS over the cardiac cycle while conditioned on a range of different inflow boundary conditions.
arXiv Detail & Related papers (2022-12-09T18:16:06Z) - Machine-Learning Identification of Hemodynamics in Coronary Arteries in
the Presence of Stenosis [0.0]
An artificial neural network (ANN) model is trained using synthetic data to predict the pressure and velocity within the arterial network.
The efficiency of the model was verified using three real geometries of LAD's vessels.
arXiv Detail & Related papers (2021-11-02T23:51:06Z) - Influence Estimation and Maximization via Neural Mean-Field Dynamics [60.91291234832546]
We propose a novel learning framework using neural mean-field (NMF) dynamics for inference and estimation problems.
Our framework can simultaneously learn the structure of the diffusion network and the evolution of node infection probabilities.
arXiv Detail & Related papers (2021-06-03T00:02:05Z) - Neural Network-derived perfusion maps: a Model-free approach to computed
tomography perfusion in patients with acute ischemic stroke [4.925222726301579]
Convolutional Neural Network (CNN) can generate clinically relevant parametric maps from CT perfusion data.
Our CNN-based approach generated clinically relevant perfusion maps that are comparable to state-of-the-art perfusion analysis methods.
arXiv Detail & Related papers (2021-01-15T07:11:02Z) - Physics-informed neural networks for myocardial perfusion MRI
quantification [3.318100528966778]
This study introduces physics-informed neural networks (PINNs) as a means to perform myocardial perfusion MR quantification.
PINNs can be trained to fit the observed perfusion MR data while respecting the underlying physical conservation laws.
arXiv Detail & Related papers (2020-11-25T16:02:52Z) - Network Diffusions via Neural Mean-Field Dynamics [52.091487866968286]
We propose a novel learning framework for inference and estimation problems of diffusion on networks.
Our framework is derived from the Mori-Zwanzig formalism to obtain an exact evolution of the node infection probabilities.
Our approach is versatile and robust to variations of the underlying diffusion network models.
arXiv Detail & Related papers (2020-06-16T18:45:20Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.