False Discovery Rate Control for Gaussian Graphical Models via
Neighborhood Screening
- URL: http://arxiv.org/abs/2401.09979v1
- Date: Thu, 18 Jan 2024 13:46:41 GMT
- Title: False Discovery Rate Control for Gaussian Graphical Models via
Neighborhood Screening
- Authors: Taulant Koka, Jasin Machkour, Michael Muma
- Abstract summary: We introduce a nodewise variable selection approach to graph learning and provably control the false discovery rate of the selected edge set at a self-estimated level.
A novel fusion method of the individual neighborhoods outputs an undirected graph estimate.
- Score: 1.7924920920347915
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Gaussian graphical models emerge in a wide range of fields. They model the
statistical relationships between variables as a graph, where an edge between
two variables indicates conditional dependence. Unfortunately, well-established
estimators, such as the graphical lasso or neighborhood selection, are known to
be susceptible to a high prevalence of false edge detections. False detections
may encourage inaccurate or even incorrect scientific interpretations, with
major implications in applications, such as biomedicine or healthcare. In this
paper, we introduce a nodewise variable selection approach to graph learning
and provably control the false discovery rate of the selected edge set at a
self-estimated level. A novel fusion method of the individual neighborhoods
outputs an undirected graph estimate. The proposed method is parameter-free and
does not require tuning by the user. Benchmarks against competing false
discovery rate controlling methods in numerical experiments considering
different graph topologies show a significant gain in performance.
Related papers
- Extreme Value Modelling of Feature Residuals for Anomaly Detection in Dynamic Graphs [14.8066991252587]
detecting anomalies in a temporal sequence of graphs can be applied to areas such as the detection of accidents in transport networks and cyber attacks in computer networks.
Existing methods for detecting abnormal graphs can suffer from multiple limitations, such as high false positive rates and difficulties with handling variable-sized graphs and non-trivial temporal dynamics.
We propose a technique where temporal dependencies are explicitly modelled via time series analysis of a large set of pertinent graph features, followed by using residuals to remove the dependencies.
arXiv Detail & Related papers (2024-10-08T05:00:53Z) - Asymmetric Graph Error Control with Low Complexity in Causal Bandits [21.812120023339876]
The objective is to select an optimal sequence of interventions on nodes in a causal graph.
By exploiting the causal relationships between the nodes whose signals contribute to the reward, interventions are optimized.
arXiv Detail & Related papers (2024-08-20T23:37:08Z) - Generation is better than Modification: Combating High Class Homophily Variance in Graph Anomaly Detection [51.11833609431406]
Homophily distribution differences between different classes are significantly greater than those in homophilic and heterophilic graphs.
We introduce a new metric called Class Homophily Variance, which quantitatively describes this phenomenon.
To mitigate its impact, we propose a novel GNN model named Homophily Edge Generation Graph Neural Network (HedGe)
arXiv Detail & Related papers (2024-03-15T14:26:53Z) - Mitigating Label Noise on Graph via Topological Sample Selection [72.86862597508077]
We propose a $textitTopological Sample Selection$ (TSS) method that boosts the informative sample selection process in a graph by utilising topological information.
We theoretically prove that our procedure minimizes an upper bound of the expected risk under target clean distribution, and experimentally show the superiority of our method compared with state-of-the-art baselines.
arXiv Detail & Related papers (2024-03-04T11:24:51Z) - Graph Out-of-Distribution Generalization with Controllable Data
Augmentation [51.17476258673232]
Graph Neural Network (GNN) has demonstrated extraordinary performance in classifying graph properties.
Due to the selection bias of training and testing data, distribution deviation is widespread.
We propose OOD calibration to measure the distribution deviation of virtual samples.
arXiv Detail & Related papers (2023-08-16T13:10:27Z) - Neural Graph Revealers [2.2721854258621064]
We propose Neural Graph Revealers (NGRs) to efficiently merge sparse graph recovery methods with Probabilistic Graphical Models.
NGRs view the neural networks as a glass box' or more specifically as a multitask learning framework.
We show experimental results of doing sparse graph recovery and probabilistic inference on data from Gaussian graphical models and a multimodal infant mortality dataset by Centers for Disease Control and Prevention.
arXiv Detail & Related papers (2023-02-27T08:40:45Z) - Bayesian Graph Contrastive Learning [55.36652660268726]
We propose a novel perspective of graph contrastive learning methods showing random augmentations leads to encoders.
Our proposed method represents each node by a distribution in the latent space in contrast to existing techniques which embed each node to a deterministic vector.
We show a considerable improvement in performance compared to existing state-of-the-art methods on several benchmark datasets.
arXiv Detail & Related papers (2021-12-15T01:45:32Z) - Distributionally Robust Semi-Supervised Learning Over Graphs [68.29280230284712]
Semi-supervised learning (SSL) over graph-structured data emerges in many network science applications.
To efficiently manage learning over graphs, variants of graph neural networks (GNNs) have been developed recently.
Despite their success in practice, most of existing methods are unable to handle graphs with uncertain nodal attributes.
Challenges also arise due to distributional uncertainties associated with data acquired by noisy measurements.
A distributionally robust learning framework is developed, where the objective is to train models that exhibit quantifiable robustness against perturbations.
arXiv Detail & Related papers (2021-10-20T14:23:54Z) - Issues with Propagation Based Models for Graph-Level Outlier Detection [16.980621769406916]
Graph-Level Outlier Detection ( GLOD) is the task of identifying unusual graphs within a graph database.
This paper identifies and delves into a fundamental and intriguing issue with applying propagation based models to GLOD.
We find that ROC-AUC performance of the models change significantly depending on which class is down-sampled.
arXiv Detail & Related papers (2020-12-23T19:38:21Z) - Block-Approximated Exponential Random Graphs [77.4792558024487]
An important challenge in the field of exponential random graphs (ERGs) is the fitting of non-trivial ERGs on large graphs.
We propose an approximative framework to such non-trivial ERGs that result in dyadic independence (i.e., edge independent) distributions.
Our methods are scalable to sparse graphs consisting of millions of nodes.
arXiv Detail & Related papers (2020-02-14T11:42:16Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.