DREAMS: A python framework to train deep learning models with model card reporting for medical and health applications
- URL: http://arxiv.org/abs/2409.17815v1
- Date: Thu, 26 Sep 2024 13:12:13 GMT
- Title: DREAMS: A python framework to train deep learning models with model card reporting for medical and health applications
- Authors: Rabindra Khadka, Pedro G Lind, Anis Yazidi, Asma Belhadi,
- Abstract summary: We introduce a comprehensive deep learning framework tailored for EEG data processing, model training and report generation.
While constructed in way to be adapted and developed further by AI developers, it enables to report, through model cards, the outcome and specific information of use for both developers and clinicians.
- Score: 7.2934799091933815
- License: http://creativecommons.org/licenses/by/4.0/
- Abstract: Electroencephalography (EEG) data provides a non-invasive method for researchers and clinicians to observe brain activity in real time. The integration of deep learning techniques with EEG data has significantly improved the ability to identify meaningful patterns, leading to valuable insights for both clinical and research purposes. However, most of the frameworks so far, designed for EEG data analysis, are either too focused on pre-processing or in deep learning methods per, making their use for both clinician and developer communities problematic. Moreover, critical issues such as ethical considerations, biases, uncertainties, and the limitations inherent in AI models for EEG data analysis are frequently overlooked, posing challenges to the responsible implementation of these technologies. In this paper, we introduce a comprehensive deep learning framework tailored for EEG data processing, model training and report generation. While constructed in way to be adapted and developed further by AI developers, it enables to report, through model cards, the outcome and specific information of use for both developers and clinicians. In this way, we discuss how this framework can, in the future, provide clinical researchers and developers with the tools needed to create transparent and accountable AI models for EEG data analysis and diagnosis.
Related papers
- Health AI Developer Foundations [18.690656891269686]
Health AI Developer Foundations (HAI-DEF) is a suite of pre-trained, domain-specific foundation models, tools, and recipes to accelerate building Machine Learning for health applications.
Models cover various modalities and domains, including radiology (X-rays and computed tomography), histopathology, dermatological imaging, and audio.
These models provide domain specific embeddings that facilitate AI development with less labeled data, shorter training times, and reduced computational costs.
arXiv Detail & Related papers (2024-11-22T18:51:51Z) - Explainable AI Methods for Multi-Omics Analysis: A Survey [3.885941688264509]
Multi-omics refers to the integrative analysis of data derived from multiple 'omes'
Deep learning methods are increasingly utilized to integrate multi-omics data, offering insights into molecular interactions and enhancing research into complex diseases.
These models, with their numerous interconnected layers and nonlinear relationships, often function as black boxes, lacking transparency in decision-making processes.
This review explores how xAI can improve the interpretability of deep learning models in multi-omics research, highlighting its potential to provide clinicians with clear insights.
arXiv Detail & Related papers (2024-10-15T05:01:17Z) - Data Analysis in the Era of Generative AI [56.44807642944589]
This paper explores the potential of AI-powered tools to reshape data analysis, focusing on design considerations and challenges.
We explore how the emergence of large language and multimodal models offers new opportunities to enhance various stages of data analysis workflow.
We then examine human-centered design principles that facilitate intuitive interactions, build user trust, and streamline the AI-assisted analysis workflow across multiple apps.
arXiv Detail & Related papers (2024-09-27T06:31:03Z) - Generative AI for Health Technology Assessment: Opportunities, Challenges, and Policy Considerations [12.73011921253]
This review introduces the transformative potential of generative Artificial Intelligence (AI) and foundation models, including large language models (LLMs), for health technology assessment (HTA)
We explore their applications in four critical areas, synthesis evidence, evidence generation, clinical trials and economic modeling.
Despite their promise, these technologies, while rapidly improving, are still nascent and continued careful evaluation in their applications to HTA is required.
arXiv Detail & Related papers (2024-07-09T09:25:27Z) - A Survey of Models for Cognitive Diagnosis: New Developments and Future Directions [66.40362209055023]
This paper aims to provide a survey of current models for cognitive diagnosis, with more attention on new developments using machine learning-based methods.
By comparing the model structures, parameter estimation algorithms, model evaluation methods and applications, we provide a relatively comprehensive review of the recent trends in cognitive diagnosis models.
arXiv Detail & Related papers (2024-07-07T18:02:00Z) - Recent Advances in Predictive Modeling with Electronic Health Records [71.19967863320647]
utilizing EHR data for predictive modeling presents several challenges due to its unique characteristics.
Deep learning has demonstrated its superiority in various applications, including healthcare.
arXiv Detail & Related papers (2024-02-02T00:31:01Z) - Deployment of a Robust and Explainable Mortality Prediction Model: The
COVID-19 Pandemic and Beyond [0.59374762912328]
This study investigated the performance, explainability, and robustness of deployed artificial intelligence (AI) models in predicting mortality during the COVID-19 pandemic and beyond.
arXiv Detail & Related papers (2023-11-28T18:15:53Z) - AutoPrognosis 2.0: Democratizing Diagnostic and Prognostic Modeling in
Healthcare with Automated Machine Learning [72.2614468437919]
We present a machine learning framework, AutoPrognosis 2.0, to develop diagnostic and prognostic models.
We provide an illustrative application where we construct a prognostic risk score for diabetes using the UK Biobank.
Our risk score has been implemented as a web-based decision support tool and can be publicly accessed by patients and clinicians worldwide.
arXiv Detail & Related papers (2022-10-21T16:31:46Z) - Deep learning for temporal data representation in electronic health
records: A systematic review of challenges and methodologies [11.584972135829199]
Temporal electronic health records can be a wealth of information for secondary uses, such as clinical events prediction or chronic disease management.
We sought articles that reported deep learning methodologies on temporal data representation in structured EHR data from January 1, 2010, to August 30, 2020.
Four major challenges were identified, including data irregularity, data heterogeneity, data sparsity, and model opacity.
arXiv Detail & Related papers (2021-07-21T09:00:40Z) - Uncovering the structure of clinical EEG signals with self-supervised
learning [64.4754948595556]
Supervised learning paradigms are often limited by the amount of labeled data that is available.
This phenomenon is particularly problematic in clinically-relevant data, such as electroencephalography (EEG)
By extracting information from unlabeled data, it might be possible to reach competitive performance with deep neural networks.
arXiv Detail & Related papers (2020-07-31T14:34:47Z) - Opportunities and Challenges of Deep Learning Methods for
Electrocardiogram Data: A Systematic Review [62.490310870300746]
The electrocardiogram (ECG) is one of the most commonly used diagnostic tools in medicine and healthcare.
Deep learning methods have achieved promising results on predictive healthcare tasks using ECG signals.
This paper presents a systematic review of deep learning methods for ECG data from both modeling and application perspectives.
arXiv Detail & Related papers (2019-12-28T02:44:29Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.