Enhancing Glucose Level Prediction of ICU Patients through Hierarchical Modeling of Irregular Time-Series
- URL: http://arxiv.org/abs/2411.01418v2
- Date: Sun, 26 Jan 2025 17:40:38 GMT
- Title: Enhancing Glucose Level Prediction of ICU Patients through Hierarchical Modeling of Irregular Time-Series
- Authors: Hadi Mehdizavareh, Arijit Khan, Simon Lebech Cichosz,
- Abstract summary: Multi-source Irregular Time-Series Transformer (MITST) designed to predict blood glucose (BG) levels in ICU patients.<n>MITST employs hierarchical architecture of Transformers, comprising feature-level, timestamp, and source-level components.
- Score: 4.101915841246237
- License: http://creativecommons.org/licenses/by-nc-nd/4.0/
- Abstract: Accurately predicting blood glucose (BG) levels of ICU patients is critical, as both hypoglycemia (BG < 70 mg/dL) and hyperglycemia (BG > 180 mg/dL) are associated with increased morbidity and mortality. This study presents a proof-of-concept machine learning framework, the Multi-source Irregular Time-Series Transformer (MITST), designed to predict blood glucose (BG) levels in ICU patients. Unlike existing approaches that rely on manual feature engineering or are limited to a small number of Electronic Health Record (EHR) data sources, MITST demonstrates the feasibility of integrating diverse clinical data (e.g., lab results, medications, vital signs) and handling irregular time-series data without predefined aggregation. MITST employs a hierarchical architecture of Transformers, comprising feature-level, timestamp-level, and source-level components, to capture fine-grained temporal dynamics and enable learning-based data integration. This eliminates the need for traditional aggregation and manual feature engineering. In a large-scale evaluation using the eICU database (200,859 ICU stays across 208 hospitals), MITST achieves an average improvement of 1.7% (p < 0.001) in AUROC and 1.8% (p < 0.001) in AUPRC over a state-of-the-art baseline. For hypoglycemia, MITST achieves an AUROC of 0.915 and an AUPRC of 0.247, both significantly outperforming the baseline. The flexible architecture of MITST allows seamless integration of new data sources without retraining the entire model, enhancing its adaptability for clinical decision support. While this study focuses on predicting BG levels, MITST can easily be extended to other critical event prediction tasks in ICU settings, offering a robust solution for analyzing complex, multi-source, irregular time-series data.
Related papers
- BioSerenity-E1: a self-supervised EEG model for medical applications [0.0]
BioSerenity-E1 is a family of self-supervised foundation models for clinical EEG applications.
It combines spectral tokenization with masked prediction to achieve state-of-the-art performance across relevant diagnostic tasks.
arXiv Detail & Related papers (2025-03-13T13:42:46Z) - rECGnition_v2.0: Self-Attentive Canonical Fusion of ECG and Patient Data using deep learning for effective Cardiac Diagnostics [0.56337958460022]
This study uses MIT-BIH Arrhythmia dataset to evaluate the efficiency of rECGnition_v2.0 for various classes of arrhythmias.
The compact architectural footprint of the rECGnition_v2.0, characterized by its lesser trainable parameters, unfurled several advantages including interpretability and scalability.
arXiv Detail & Related papers (2025-02-22T15:16:46Z) - Finetuning and Quantization of EEG-Based Foundational BioSignal Models on ECG and PPG Data for Blood Pressure Estimation [53.2981100111204]
Photoplethysmography and electrocardiography can potentially enable continuous blood pressure (BP) monitoring.
Yet accurate and robust machine learning (ML) models remains challenging due to variability in data quality and patient-specific factors.
In this work, we investigate whether a model pre-trained on one modality can effectively be exploited to improve the accuracy of a different signal type.
Our approach achieves near state-of-the-art accuracy for diastolic BP and surpasses by 1.5x the accuracy of prior works for systolic BP.
arXiv Detail & Related papers (2025-02-10T13:33:12Z) - CardioLab: Laboratory Values Estimation and Monitoring from Electrocardiogram Signals -- A Multimodal Deep Learning Approach [1.068128849363198]
We utilize MIMIC-IV dataset to develop multimodal deep-learning models to demonstrate the feasibility of estimating (real-time) and monitoring (predict at future intervals) laboratory value abnormalities.
The models exhibit a strong predictive performance with AUROC scores above 0.70 in a statistically significant manner for 23 laboratory values in the estimation setting and up to 26 values in the monitoring setting.
arXiv Detail & Related papers (2024-11-22T12:10:03Z) - A Hybrid Artificial Intelligence System for Automated EEG Background Analysis and Report Generation [0.1874930567916036]
This study proposes an innovative hybrid artificial intelligence (AI) system for automatic interpretation of EEG background activity and report generation.
The system combines deep learning models for posterior dominant rhythm (PDR) prediction, unsupervised artifact removal, and expert-designed algorithms for abnormality detection.
The AI system significantly outperformed neurologists in detecting generalized background slowing and improved focal abnormality detection.
arXiv Detail & Related papers (2024-11-15T01:49:17Z) - FedCVD: The First Real-World Federated Learning Benchmark on Cardiovascular Disease Data [52.55123685248105]
Cardiovascular diseases (CVDs) are currently the leading cause of death worldwide, highlighting the critical need for early diagnosis and treatment.
Machine learning (ML) methods can help diagnose CVDs early, but their performance relies on access to substantial data with high quality.
This paper presents the first real-world FL benchmark for cardiovascular disease detection, named FedCVD.
arXiv Detail & Related papers (2024-10-28T02:24:01Z) - DeLLiriuM: A large language model for delirium prediction in the ICU using structured EHR [1.4699314771635081]
Delirium is an acute confusional state that has been shown to affect up to 31% of patients in the intensive care unit (ICU)
We develop and validate DeLLiriuM on ICU admissions from 104,303 patients pertaining to 195 hospitals across three large databases.
arXiv Detail & Related papers (2024-10-22T18:56:31Z) - Optimizing Mortality Prediction for ICU Heart Failure Patients: Leveraging XGBoost and Advanced Machine Learning with the MIMIC-III Database [1.5186937600119894]
Heart failure affects millions of people worldwide, significantly reducing quality of life and leading to high mortality rates.
Despite extensive research, the relationship between heart failure and mortality rates among ICU patients is not fully understood.
This study analyzed data from 1,177 patients over 18 years old from the MIMIC-III database, identified using ICD-9 codes.
arXiv Detail & Related papers (2024-09-03T07:57:08Z) - Using Pre-training and Interaction Modeling for ancestry-specific disease prediction in UK Biobank [69.90493129893112]
Recent genome-wide association studies (GWAS) have uncovered the genetic basis of complex traits, but show an under-representation of non-European descent individuals.
Here, we assess whether we can improve disease prediction across diverse ancestries using multiomic data.
arXiv Detail & Related papers (2024-04-26T16:39:50Z) - Multimodal Pretraining of Medical Time Series and Notes [45.89025874396911]
Deep learning models show promise in extracting meaningful patterns, but they require extensive labeled data.
We propose a novel approach employing self-supervised pretraining, focusing on the alignment of clinical measurements and notes.
In downstream tasks, including in-hospital mortality prediction and phenotyping, our model outperforms baselines in settings where only a fraction of the data is labeled.
arXiv Detail & Related papers (2023-12-11T21:53:40Z) - Machine Learning based prediction of Glucose Levels in Type 1 Diabetes
Patients with the use of Continuous Glucose Monitoring Data [0.0]
Continuous Glucose Monitoring (CGM) devices offer detailed, non-intrusive and real time insights into a patient's blood glucose concentrations.
Leveraging advanced Machine Learning (ML) Models as methods of prediction of future glucose levels, gives rise to substantial quality of life improvements.
arXiv Detail & Related papers (2023-02-24T19:10:40Z) - Learning to diagnose cirrhosis from radiological and histological labels
with joint self and weakly-supervised pretraining strategies [62.840338941861134]
We propose to leverage transfer learning from large datasets annotated by radiologists, to predict the histological score available on a small annex dataset.
We compare different pretraining methods, namely weakly-supervised and self-supervised ones, to improve the prediction of the cirrhosis.
This method outperforms the baseline classification of the METAVIR score, reaching an AUC of 0.84 and a balanced accuracy of 0.75.
arXiv Detail & Related papers (2023-02-16T17:06:23Z) - Clinical Deterioration Prediction in Brazilian Hospitals Based on
Artificial Neural Networks and Tree Decision Models [56.93322937189087]
An extremely boosted neural network (XBNet) is used to predict clinical deterioration (CD)
The XGBoost model obtained the best results in predicting CD among Brazilian hospitals' data.
arXiv Detail & Related papers (2022-12-17T23:29:14Z) - SOUL: An Energy-Efficient Unsupervised Online Learning Seizure Detection
Classifier [68.8204255655161]
Implantable devices that record neural activity and detect seizures have been adopted to issue warnings or trigger neurostimulation to suppress seizures.
For an implantable seizure detection system, a low power, at-the-edge, online learning algorithm can be employed to dynamically adapt to neural signal drifts.
SOUL was fabricated in TSMC's 28 nm process occupying 0.1 mm2 and achieves 1.5 nJ/classification energy efficiency, which is at least 24x more efficient than state-of-the-art.
arXiv Detail & Related papers (2021-10-01T23:01:20Z) - Bootstrapping Your Own Positive Sample: Contrastive Learning With
Electronic Health Record Data [62.29031007761901]
This paper proposes a novel contrastive regularized clinical classification model.
We introduce two unique positive sampling strategies specifically tailored for EHR data.
Our framework yields highly competitive experimental results in predicting the mortality risk on real-world COVID-19 EHR data.
arXiv Detail & Related papers (2021-04-07T06:02:04Z) - Contrastive Learning Improves Critical Event Prediction in COVID-19
Patients [19.419685256069666]
We show that contrastive loss (CL) improves the performance of cross-entropy loss (CEL) for imbalanced EHR data.
This study has been approved by the Institutional Review Board at the Icahn School of Medicine at Mount Sinai.
arXiv Detail & Related papers (2021-01-11T16:41:13Z) - Automated Quantification of CT Patterns Associated with COVID-19 from
Chest CT [48.785596536318884]
The proposed method takes as input a non-contrasted chest CT and segments the lesions, lungs, and lobes in three dimensions.
The method outputs two combined measures of the severity of lung and lobe involvement, quantifying both the extent of COVID-19 abnormalities and presence of high opacities.
Evaluation of the algorithm is reported on CTs of 200 participants (100 COVID-19 confirmed patients and 100 healthy controls) from institutions from Canada, Europe and the United States.
arXiv Detail & Related papers (2020-04-02T21:49:14Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.