Diagnosing Medical Datasets with Training Dynamics
- URL: http://arxiv.org/abs/2411.01653v1
- Date: Sun, 03 Nov 2024 18:37:35 GMT
- Title: Diagnosing Medical Datasets with Training Dynamics
- Authors: Laura Wenderoth,
- Abstract summary: This study explores the potential of using training dynamics as an automated alternative to human annotation.
The framework used is Data Maps, which classifies data points into categories such as easy-to-learn, hard-to-learn, and ambiguous.
A comprehensive evaluation was conducted to assess the feasibility and transferability of the Data Maps framework to the medical domain.
- Score: 0.0
- License:
- Abstract: This study explores the potential of using training dynamics as an automated alternative to human annotation for evaluating the quality of training data. The framework used is Data Maps, which classifies data points into categories such as easy-to-learn, hard-to-learn, and ambiguous (Swayamdipta et al., 2020). Swayamdipta et al. (2020) highlight that difficult-to-learn examples often contain errors, and ambiguous cases significantly impact model training. To confirm the reliability of these findings, we replicated the experiments using a challenging dataset, with a focus on medical question answering. In addition to text comprehension, this field requires the acquisition of detailed medical knowledge, which further complicates the task. A comprehensive evaluation was conducted to assess the feasibility and transferability of the Data Maps framework to the medical domain. The evaluation indicates that the framework is unsuitable for addressing datasets' unique challenges in answering medical questions.
Related papers
- TrialBench: Multi-Modal Artificial Intelligence-Ready Clinical Trial Datasets [57.067409211231244]
This paper presents meticulously curated AIready datasets covering multi-modal data (e.g., drug molecule, disease code, text, categorical/numerical features) and 8 crucial prediction challenges in clinical trial design.
We provide basic validation methods for each task to ensure the datasets' usability and reliability.
We anticipate that the availability of such open-access datasets will catalyze the development of advanced AI approaches for clinical trial design.
arXiv Detail & Related papers (2024-06-30T09:13:10Z) - A Medical Low-Back Pain Physical Rehabilitation Dataset for Human Body Movement Analysis [0.6990493129893111]
This article addresses four challenges to address and propose a medical dataset of clinical patients carrying out low back-pain rehabilitation exercises.
The dataset includes 3D Kinect skeleton positions and orientations, RGB videos, 2D skeleton data, and medical annotations to assess the correctness, and error classification and localisation of body part and timespan.
arXiv Detail & Related papers (2024-06-29T19:50:06Z) - Validity problems in clinical machine learning by indirect data labeling
using consensus definitions [18.18186817228833]
We demonstrate a validity problem of machine learning in the vital application area of disease diagnosis in medicine.
It arises when target labels in training data are determined by an indirect measurement, and the fundamental measurements needed to determine this indirect measurement are included in the input data representation.
arXiv Detail & Related papers (2023-11-06T11:14:48Z) - Medical Question Summarization with Entity-driven Contrastive Learning [12.008269098530386]
This paper proposes a novel medical question summarization framework using entity-driven contrastive learning (ECL)
ECL employs medical entities in frequently asked questions (FAQs) as focuses and devises an effective mechanism to generate hard negative samples.
We find that some MQA datasets suffer from serious data leakage problems, such as the iCliniq dataset's 33% duplicate rate.
arXiv Detail & Related papers (2023-04-15T00:19:03Z) - LifeLonger: A Benchmark for Continual Disease Classification [59.13735398630546]
We introduce LifeLonger, a benchmark for continual disease classification on the MedMNIST collection.
Task and class incremental learning of diseases address the issue of classifying new samples without re-training the models from scratch.
Cross-domain incremental learning addresses the issue of dealing with datasets originating from different institutions while retaining the previously obtained knowledge.
arXiv Detail & Related papers (2022-04-12T12:25:05Z) - A Real Use Case of Semi-Supervised Learning for Mammogram Classification
in a Local Clinic of Costa Rica [0.5541644538483946]
Training a deep learning model requires a considerable amount of labeled images.
A number of publicly available datasets have been built with data from different hospitals and clinics.
The use of the semi-supervised deep learning approach known as MixMatch, to leverage the usage of unlabeled data is proposed and evaluated.
arXiv Detail & Related papers (2021-07-24T22:26:50Z) - Estimating and Improving Fairness with Adversarial Learning [65.99330614802388]
We propose an adversarial multi-task training strategy to simultaneously mitigate and detect bias in the deep learning-based medical image analysis system.
Specifically, we propose to add a discrimination module against bias and a critical module that predicts unfairness within the base classification model.
We evaluate our framework on a large-scale public-available skin lesion dataset.
arXiv Detail & Related papers (2021-03-07T03:10:32Z) - Select-ProtoNet: Learning to Select for Few-Shot Disease Subtype
Prediction [55.94378672172967]
We focus on few-shot disease subtype prediction problem, identifying subgroups of similar patients.
We introduce meta learning techniques to develop a new model, which can extract the common experience or knowledge from interrelated clinical tasks.
Our new model is built upon a carefully designed meta-learner, called Prototypical Network, that is a simple yet effective meta learning machine for few-shot image classification.
arXiv Detail & Related papers (2020-09-02T02:50:30Z) - Semi-supervised Medical Image Classification with Relation-driven
Self-ensembling Model [71.80319052891817]
We present a relation-driven semi-supervised framework for medical image classification.
It exploits the unlabeled data by encouraging the prediction consistency of given input under perturbations.
Our method outperforms many state-of-the-art semi-supervised learning methods on both single-label and multi-label image classification scenarios.
arXiv Detail & Related papers (2020-05-15T06:57:54Z) - An Extensive Study on Cross-Dataset Bias and Evaluation Metrics
Interpretation for Machine Learning applied to Gastrointestinal Tract
Abnormality Classification [2.985964157078619]
Automatic analysis of diseases in the GI tract is a hot topic in computer science and medical-related journals.
A clear understanding of evaluation metrics and machine learning models with cross datasets is crucial to bring research in the field to a new quality level.
We present comprehensive evaluations of five distinct machine learning models that can classify 16 different GI tract conditions.
arXiv Detail & Related papers (2020-05-08T08:59:31Z) - Self-Training with Improved Regularization for Sample-Efficient Chest
X-Ray Classification [80.00316465793702]
We present a deep learning framework that enables robust modeling in challenging scenarios.
Our results show that using 85% lesser labeled data, we can build predictive models that match the performance of classifiers trained in a large-scale data setting.
arXiv Detail & Related papers (2020-05-03T02:36:00Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.