FaRMamba: Frequency-based learning and Reconstruction aided Mamba for Medical Segmentation

• URL: http://arxiv.org/abs/2507.20056v1
• Date: Sat, 26 Jul 2025 20:41:53 GMT
• Title: FaRMamba: Frequency-based learning and Reconstruction aided Mamba for Medical Segmentation
• Authors: Ze Rong, ZiYue Zhao, Zhaoxin Wang, Lei Ma,
• Abstract summary: Vision Mamba employs one-dimensional causal state-space recurrence to efficiently model global dependencies.<n>Its patch tokenization and 1D serialization disrupt local pixel adjacency and impose a low-pass filtering effect.<n>We propose FaRMamba, a novel extension that explicitly addresses LHICD and 2D-SSD through two complementary modules.
• Score: 3.5790602918760586
• License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
• Abstract: Accurate medical image segmentation remains challenging due to blurred lesion boundaries (LBA), loss of high-frequency details (LHD), and difficulty in modeling long-range anatomical structures (DC-LRSS). Vision Mamba employs one-dimensional causal state-space recurrence to efficiently model global dependencies, thereby substantially mitigating DC-LRSS. However, its patch tokenization and 1D serialization disrupt local pixel adjacency and impose a low-pass filtering effect, resulting in Local High-frequency Information Capture Deficiency (LHICD) and two-dimensional Spatial Structure Degradation (2D-SSD), which in turn exacerbate LBA and LHD. In this work, we propose FaRMamba, a novel extension that explicitly addresses LHICD and 2D-SSD through two complementary modules. A Multi-Scale Frequency Transform Module (MSFM) restores attenuated high-frequency cues by isolating and reconstructing multi-band spectra via wavelet, cosine, and Fourier transforms. A Self-Supervised Reconstruction Auxiliary Encoder (SSRAE) enforces pixel-level reconstruction on the shared Mamba encoder to recover full 2D spatial correlations, enhancing both fine textures and global context. Extensive evaluations on CAMUS echocardiography, MRI-based Mouse-cochlea, and Kvasir-Seg endoscopy demonstrate that FaRMamba consistently outperforms competitive CNN-Transformer hybrids and existing Mamba variants, delivering superior boundary accuracy, detail preservation, and global coherence without prohibitive computational overhead. This work provides a flexible frequency-aware framework for future segmentation models that directly mitigates core challenges in medical imaging.

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