Meta-D: Metadata-Aware Architectures for Brain Tumor Analysis and Missing-Modality Segmentation
- URL: http://arxiv.org/abs/2603.04811v1
- Date: Thu, 05 Mar 2026 04:54:49 GMT
- Title: Meta-D: Metadata-Aware Architectures for Brain Tumor Analysis and Missing-Modality Segmentation
- Abstract summary: We present Meta-D, an architecture that explicitly leverages categorical scanner metadata such as MRI sequence and plane orientation to guide feature extraction.<n>We first evaluate this in 2D tumor detection, where injecting sequence (e.g., T1, T2) and plane (e.g., axial) metadata dynamically modulates convolutional features.<n>Because metadata grounds feature extraction when data are available, we hypothesize it can serve as a robust anchor when data are missing.
- Score: 1.526156659531584
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: We present Meta-D, an architecture that explicitly leverages categorical scanner metadata such as MRI sequence and plane orientation to guide feature extraction for brain tumor analysis. We aim to improve the performance of medical image deep learning pipelines by integrating explicit metadata to stabilize feature representations. We first evaluate this in 2D tumor detection, where injecting sequence (e.g., T1, T2) and plane (e.g., axial) metadata dynamically modulates convolutional features, yielding an absolute increase of up to 2.62% in F1-score over image-only baselines. Because metadata grounds feature extraction when data are available, we hypothesize it can serve as a robust anchor when data are missing. We apply this to 3D missing-modality tumor segmentation. Our Transformer Maximizer utilizes metadata-based cross-attention to isolate and route available modalities, ensuring the network focuses on valid slices. This targeted attention improves brain tumor segmentation Dice scores by up to 5.12% under extreme modality scarcity while reducing model parameters by 24.1%.
Related papers
- D3Seg: Dependency-Aware Diffusion for Brain Tumor Segmentation with Missing Modalities [54.87947751720332]
We propose a novel segmentation model D3Seg to maintain stable performance under missing-modality settings.<n>The proposed model achieves approximately 1.5-2.0% Dice improvement on enhancing tumor (ET) and around 1.0% on tumor core (TC) across multiple missing modality configurations.
arXiv Detail & Related papers (2026-05-21T09:55:42Z) - Tumor-aware augmentation with task-guided attention analysis improves rectal cancer segmentation from magnetic resonance images [1.3958880590777554]
We show two interacting failure modes in CT-to-MRI transfer.<n>Inefficient token usage caused by zero-padding to match pretrained input dimensions and ineffective feature adaptation.<n>Fine-tuning on identical rectal MRI datasets improved detection rates to 224/247 (90.7%) for SMIT and 219/247 (88.7%) for Swin UNETR.
arXiv Detail & Related papers (2026-05-06T23:46:46Z) - Multimodal Visual Surrogate Compression for Alzheimer's Disease Classification [69.87877580725768]
Multimodal Visual Surrogate Compression (MVSC) learns to compress and adapt large 3D sMRI volumes into compact 2D features.<n>MVSC has two key components: a Volume Context that captures global cross-slice context under textual guidance, and an Adaptive Slice Fusion module that aggregates slice-level information in a text-enhanced, patch-wise manner.
arXiv Detail & Related papers (2026-01-29T13:05:46Z) - MRI Plane Orientation Detection using a Context-Aware 2.5D Model [1.526156659531584]
Humans can easily identify anatomical planes on a 2D MRI slice, but automated systems struggle with this task.<n>This study develops a classifier that accurately generates plane orientation metadata.<n>We train the 2.5D model on both 3D slice sequences and static 2D images.<n>We validate the utility of our generated metadata in a brain tumor detection task.
arXiv Detail & Related papers (2025-11-18T01:00:57Z) - DRBD-Mamba for Robust and Efficient Brain Tumor Segmentation with Analytical Insights [54.87947751720332]
Accurate brain tumor segmentation is significant for clinical diagnosis and treatment.<n>Mamba-based State Space Models have demonstrated promising performance.<n>We propose a dual-resolution bi-directional Mamba that captures multi-scale long-range dependencies with minimal computational overhead.
arXiv Detail & Related papers (2025-10-16T07:31:21Z) - ReCoSeg++:Extended Residual-Guided Cross-Modal Diffusion for Brain Tumor Segmentation [0.9374652839580183]
We propose a semi-supervised, two-stage framework that extends the ReCoSeg approach to the larger and more heterogeneous BraTS 2021 dataset.<n>In the first stage, a residual-guided denoising diffusion probabilistic model (DDPM) performs cross-modal synthesis by reconstructing the T1ce modality from FLAIR, T1, and T2 scans.<n>In the second stage, a lightweight U-Net takes as input the concatenation of residual maps, computed as the difference between real T1ce and synthesized T1ce, with T1, T2, and FLAIR modalities to improve whole tumor segmentation
arXiv Detail & Related papers (2025-08-01T20:24:31Z) - Graph-based Multi-Modal Interaction Lightweight Network for Brain Tumor Segmentation (GMLN-BTS) in Edge Iterative MRI Lesion Localization System (EdgeIMLocSys) [6.451534509235736]
We propose the Edge Iterative MRI Lesion Localization System (EdgeIMLocSys), which integrates Continuous Learning from Human Feedback.<n>Central to this system is the Graph-based Multi-Modal Interaction Lightweight Network for Brain Tumor (GMLN-BTS)<n>Our proposed GMLN-BTS model achieves a Dice score of 85.1% on the BraTS 2017 dataset with only 4.58 million parameters, representing a 98% reduction compared to mainstream 3D Transformer models.
arXiv Detail & Related papers (2025-07-14T07:29:49Z) - ContextMRI: Enhancing Compressed Sensing MRI through Metadata Conditioning [51.26601171361753]
We propose ContextMRI, a text-conditioned diffusion model for MRI that integrates granular metadata into the reconstruction process.<n>We show that increasing the fidelity of metadata, ranging from slice location and contrast to patient age, sex, and pathology, systematically boosts reconstruction performance.
arXiv Detail & Related papers (2025-01-08T05:15:43Z) - Towards a Benchmark for Colorectal Cancer Segmentation in Endorectal Ultrasound Videos: Dataset and Model Development [59.74920439478643]
In this paper, we collect and annotated the first benchmark dataset that covers diverse ERUS scenarios.
Our ERUS-10K dataset comprises 77 videos and 10,000 high-resolution annotated frames.
We introduce a benchmark model for colorectal cancer segmentation, named the Adaptive Sparse-context TRansformer (ASTR)
arXiv Detail & Related papers (2024-08-19T15:04:42Z) - 3DSAM-adapter: Holistic adaptation of SAM from 2D to 3D for promptable tumor segmentation [52.699139151447945]
We propose a novel adaptation method for transferring the segment anything model (SAM) from 2D to 3D for promptable medical image segmentation.
Our model can outperform domain state-of-the-art medical image segmentation models on 3 out of 4 tasks, specifically by 8.25%, 29.87%, and 10.11% for kidney tumor, pancreas tumor, colon cancer segmentation, and achieve similar performance for liver tumor segmentation.
arXiv Detail & Related papers (2023-06-23T12:09:52Z) - Integrative Imaging Informatics for Cancer Research: Workflow Automation
for Neuro-oncology (I3CR-WANO) [0.12175619840081271]
We propose an artificial intelligence-based solution for the aggregation and processing of multisequence neuro-Oncology MRI data.
Our end-to-end framework i) classifies MRI sequences using an ensemble classifier, ii) preprocesses the data in a reproducible manner, and iv) delineates tumor tissue subtypes.
It is robust to missing sequences and adopts an expert-in-the-loop approach, where the segmentation results may be manually refined by radiologists.
arXiv Detail & Related papers (2022-10-06T18:23:42Z) - Revisiting 3D Context Modeling with Supervised Pre-training for
Universal Lesion Detection in CT Slices [48.85784310158493]
We propose a Modified Pseudo-3D Feature Pyramid Network (MP3D FPN) to efficiently extract 3D context enhanced 2D features for universal lesion detection in CT slices.
With the novel pre-training method, the proposed MP3D FPN achieves state-of-the-art detection performance on the DeepLesion dataset.
The proposed 3D pre-trained weights can potentially be used to boost the performance of other 3D medical image analysis tasks.
arXiv Detail & Related papers (2020-12-16T07:11:16Z) - Convolutional 3D to 2D Patch Conversion for Pixel-wise Glioma
Segmentation in MRI Scans [22.60715394470069]
We devise a novel pixel-wise segmentation framework through a convolutional 3D to 2D MR patch conversion model.
In our architecture, both local inter-slice and global intra-slice features are jointly exploited to predict class label of the central voxel in a given patch.
arXiv Detail & Related papers (2020-10-20T20:42:52Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.