Artificial intelligence application in lymphoma diagnosis with Vision Transformer using weakly supervised training
- URL: http://arxiv.org/abs/2604.13795v1
- Date: Wed, 15 Apr 2026 12:33:17 GMT
- Title: Artificial intelligence application in lymphoma diagnosis with Vision Transformer using weakly supervised training
- Abstract summary: Vision transformers (ViT) have been shown to allow for more flexible feature detection and can outperform convolutional neural network (CNN) when pre-trained on sufficient data.<n>We deploy ViTs for morphological classification of anaplastic large cell lymphoma (ALCL) versus classic Hodgkin lymphoma (cHL)<n>Our ViT model, trained on a larger dataset of 100,000 image patches, yields evaluation metrics with significant accuracy, F1 score, and area under the curve (AUC) at 91.85%, 0.92, and 0.98, respectively.
- Score: 3.881131438027152
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Vision transformers (ViT) have been shown to allow for more flexible feature detection and can outperform convolutional neural network (CNN) when pre-trained on sufficient data. Due to their promising feature detection capabilities, we deployed ViTs for morphological classification of anaplastic large cell lymphoma (ALCL) versus classic Hodgkin lymphoma (cHL). We had previously designed a ViT model which was trained on a small dataset of 1,200 image patches in fully supervised training. That model achieved a diagnostic accuracy of 100% and an F1 score of 1.0 on the independent test set. Since fully supervised training is not a practical method due to lack of expertise resources in both the training and testing phases, we conducted a recent study on a modified approach to training data (weakly supervised training) and show that labeling training image patch automatically at the slide level of each whole-slide-image is a more practical solution for clinical use of Vision Transformer. Our ViT model, trained on a larger dataset of 100,000 image patches, yields evaluation metrics with significant accuracy, F1 score, and area under the curve (AUC) at 91.85%, 0.92, and 0.98, respectively. These are respectable values that qualify this ViT model, with weakly supervised training, as a suitable tool for a deep learning module in clinical model development using automated image patch extraction.
Related papers
- Next-Embedding Prediction Makes Strong Vision Learners [68.55755328850634]
We train models to generate embeddings to perform predictive tasks directly.<n>Next-Embedding Predictive Autoregression (NEPA) achieves strong results across tasks.<n>We believe generative pretraining from embeddings provides a simple, scalable, and potentially modality-agnostic alternative to visual self-supervised learning.
arXiv Detail & Related papers (2025-12-18T18:59:58Z) - An empirical study for the early detection of Mpox from skin lesion images using pretrained CNN models leveraging XAI technique [0.471858286267785]
Mpox is a zoonotic disease caused by the Mpox virus, which shares similarities with other skin conditions.<n>This study aims to evaluate the effectiveness of pre-trained CNN models for the early detection of monkeypox.<n>It also seeks to enhance model interpretability using Grad-CAM an XAI technique.
arXiv Detail & Related papers (2025-07-21T17:30:08Z) - Artificial intelligence application in lymphoma diagnosis: from Convolutional Neural Network to Vision Transformer [34.04248949660201]
We compare the classification performance of vision transformer to our previously designed convolutional neural network on the same dataset.<n>To the best of the authors' knowledge, this is the first direct comparison of predictive performance between a vision transformer model and a convolutional neural network model.
arXiv Detail & Related papers (2025-04-05T02:33:34Z) - Explainable AI-Driven Detection of Human Monkeypox Using Deep Learning and Vision Transformers: A Comprehensive Analysis [0.20482269513546453]
mpox is a zoonotic viral illness that poses a significant public health concern.<n>It is difficult to make an early clinical diagnosis because of how closely its symptoms match those of measles and chickenpox.<n>Medical imaging combined with deep learning (DL) techniques has shown promise in improving disease detection by analyzing affected skin areas.<n>Our study explore the feasibility to train deep learning and vision transformer-based models from scratch with publicly available skin lesion image dataset.
arXiv Detail & Related papers (2025-04-03T19:45:22Z) - Designing Pre-training Datasets from Unlabeled Data for EEG Classification with Transformers [0.0]
We present a way to design several labeled datasets from unlabeled electroencephalogram (EEG) data.
These can then be used to pre-train transformers to learn representations of EEG signals.
We tested this method on an epileptic seizure forecasting task on the Temple University Seizure Detection Corpus.
arXiv Detail & Related papers (2024-09-23T13:26:13Z) - ExPLoRA: Parameter-Efficient Extended Pre-Training to Adapt Vision Transformers under Domain Shifts [52.1635661239108]
We introduce ExPLoRA, a highly effective technique to improve transfer learning of pre-trained vision transformers (ViTs) under domain shifts.<n>Our experiments demonstrate state-of-the-art results on satellite imagery, even outperforming fully pre-training and fine-tuning ViTs.
arXiv Detail & Related papers (2024-06-16T15:14:56Z) - Efficiently Training Vision Transformers on Structural MRI Scans for
Alzheimer's Disease Detection [2.359557447960552]
Vision transformers (ViT) have emerged in recent years as an alternative to CNNs for several computer vision applications.
We tested variants of the ViT architecture for a range of desired neuroimaging downstream tasks based on difficulty.
We achieved a performance boost of 5% and 9-10% upon fine-tuning vision transformer models pre-trained on synthetic and real MRI scans.
arXiv Detail & Related papers (2023-03-14T20:18:12Z) - EfficientTrain: Exploring Generalized Curriculum Learning for Training
Visual Backbones [80.662250618795]
This paper presents a new curriculum learning approach for the efficient training of visual backbones (e.g., vision Transformers)
As an off-the-shelf method, it reduces the wall-time training cost of a wide variety of popular models by >1.5x on ImageNet-1K/22K without sacrificing accuracy.
arXiv Detail & Related papers (2022-11-17T17:38:55Z) - Self-supervised contrastive learning of echocardiogram videos enables
label-efficient cardiac disease diagnosis [48.64462717254158]
We developed a self-supervised contrastive learning approach, EchoCLR, to catered to echocardiogram videos.
When fine-tuned on small portions of labeled data, EchoCLR pretraining significantly improved classification performance for left ventricular hypertrophy (LVH) and aortic stenosis (AS)
EchoCLR is unique in its ability to learn representations of medical videos and demonstrates that SSL can enable label-efficient disease classification from small, labeled datasets.
arXiv Detail & Related papers (2022-07-23T19:17:26Z) - Self-Supervised Pretraining Improves Self-Supervised Pretraining [83.1423204498361]
Self-supervised pretraining requires expensive and lengthy computation, large amounts of data, and is sensitive to data augmentation.
This paper explores Hierarchical PreTraining (HPT), which decreases convergence time and improves accuracy by initializing the pretraining process with an existing pretrained model.
We show HPT converges up to 80x faster, improves accuracy across tasks, and improves the robustness of the self-supervised pretraining process to changes in the image augmentation policy or amount of pretraining data.
arXiv Detail & Related papers (2021-03-23T17:37:51Z) - A Multi-Stage Attentive Transfer Learning Framework for Improving
COVID-19 Diagnosis [49.3704402041314]
We propose a multi-stage attentive transfer learning framework for improving COVID-19 diagnosis.
Our proposed framework consists of three stages to train accurate diagnosis models through learning knowledge from multiple source tasks and data of different domains.
Importantly, we propose a novel self-supervised learning method to learn multi-scale representations for lung CT images.
arXiv Detail & Related papers (2021-01-14T01:39:19Z) - Self-Training with Improved Regularization for Sample-Efficient Chest
X-Ray Classification [80.00316465793702]
We present a deep learning framework that enables robust modeling in challenging scenarios.
Our results show that using 85% lesser labeled data, we can build predictive models that match the performance of classifiers trained in a large-scale data setting.
arXiv Detail & Related papers (2020-05-03T02:36:00Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.