Generating Electronic Health Records with Multiple Data Types and Constraints

• URL: http://arxiv.org/abs/2003.07904v2
• Date: Mon, 23 Mar 2020 22:01:37 GMT
• Title: Generating Electronic Health Records with Multiple Data Types and Constraints
• Authors: Chao Yan, Ziqi Zhang, Steve Nyemba, Bradley A. Malin
• Abstract summary: Sharing electronic health records (EHRs) on a large scale may lead to privacy intrusions. Recent research has shown that risks may be mitigated by simulating EHRs through generative adversarial network (GAN) frameworks. We introduce a method to simulate EHRs composed of multiple data types by 1) refining the GAN model, 2) accounting for feature constraints, and 3) incorporating key utility measures for such generation tasks.
• Score: 17.32526100692928
• License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
• Abstract: Sharing electronic health records (EHRs) on a large scale may lead to privacy intrusions. Recent research has shown that risks may be mitigated by simulating EHRs through generative adversarial network (GAN) frameworks. Yet the methods developed to date are limited because they 1) focus on generating data of a single type (e.g., diagnosis codes), neglecting other data types (e.g., demographics, procedures or vital signs) and 2) do not represent constraints between features. In this paper, we introduce a method to simulate EHRs composed of multiple data types by 1) refining the GAN model, 2) accounting for feature constraints, and 3) incorporating key utility measures for such generation tasks. Our analysis with over $770,000$ EHRs from Vanderbilt University Medical Center demonstrates that the new model achieves higher performance in terms of retaining basic statistics, cross-feature correlations, latent structural properties, feature constraints and associated patterns from real data, without sacrificing privacy.

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