Orbital Graph Convolutional Neural Network for Material Property
Prediction
- URL: http://arxiv.org/abs/2008.06415v1
- Date: Fri, 14 Aug 2020 15:22:22 GMT
- Title: Orbital Graph Convolutional Neural Network for Material Property
Prediction
- Authors: Mohammadreza Karamad, Rishikesh Magar, Yuting Shi, Samira Siahrostami,
Ian D. Gates and Amir Barati Farimani
- Abstract summary: We propose the Orbital Graph Convolutional Neural Network (OGCNN), a crystal graph convolutional neural network framework.
OGCNN includes atomic orbital interaction features that learn material properties in a robust way.
We examined the performance of this model on a broad range of crystalline material data to predict different properties.
- Score: 0.0
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Material representations that are compatible with machine learning models
play a key role in developing models that exhibit high accuracy for property
prediction. Atomic orbital interactions are one of the important factors that
govern the properties of crystalline materials, from which the local chemical
environments of atoms is inferred. Therefore, to develop robust machine
learningmodels for material properties prediction, it is imperative to include
features representing such chemical attributes. Here, we propose the Orbital
Graph Convolutional Neural Network (OGCNN), a crystal graph convolutional
neural network framework that includes atomic orbital interaction features that
learns material properties in a robust way. In addition, we embedded an
encoder-decoder network into the OGCNN enabling it to learn important features
among basic atomic (elemental features), orbital-orbital interactions, and
topological features. We examined the performance of this model on a broad
range of crystalline material data to predict different properties. We
benchmarked the performance of the OGCNN model with that of: 1) the crystal
graph convolutional neural network (CGCNN), 2) other state-of-the-art
descriptors for material representations including Many-body Tensor
Representation (MBTR) and the Smooth Overlap of Atomic Positions (SOAP), and 3)
other conventional regression machine learning algorithms where different
crystal featurization methods have been used. We find that OGCNN significantly
outperforms them. The OGCNN model with high predictive accuracy can be used to
discover new materials among the immense phase and compound spaces of materials
Related papers
- CrysAtom: Distributed Representation of Atoms for Crystal Property Prediction [0.0]
In material science literature, it is well-known that crystalline materials exhibit topological structures.
In this paper, we propose an unsupervised framework namely, CrysAtom, using untagged crystal data to generate dense vector representation of atoms.
arXiv Detail & Related papers (2024-09-07T06:58:55Z) - Atomic and Subgraph-aware Bilateral Aggregation for Molecular
Representation Learning [57.670845619155195]
We introduce a new model for molecular representation learning called the Atomic and Subgraph-aware Bilateral Aggregation (ASBA)
ASBA addresses the limitations of previous atom-wise and subgraph-wise models by incorporating both types of information.
Our method offers a more comprehensive way to learn representations for molecular property prediction and has broad potential in drug and material discovery applications.
arXiv Detail & Related papers (2023-05-22T00:56:00Z) - Transferability of coVariance Neural Networks and Application to
Interpretable Brain Age Prediction using Anatomical Features [119.45320143101381]
Graph convolutional networks (GCN) leverage topology-driven graph convolutional operations to combine information across the graph for inference tasks.
We have studied GCNs with covariance matrices as graphs in the form of coVariance neural networks (VNNs)
VNNs inherit the scale-free data processing architecture from GCNs and here, we show that VNNs exhibit transferability of performance over datasets whose covariance matrices converge to a limit object.
arXiv Detail & Related papers (2023-05-02T22:15:54Z) - Molecular Geometry-aware Transformer for accurate 3D Atomic System
modeling [51.83761266429285]
We propose a novel Transformer architecture that takes nodes (atoms) and edges (bonds and nonbonding atom pairs) as inputs and models the interactions among them.
Moleformer achieves state-of-the-art on the initial state to relaxed energy prediction of OC20 and is very competitive in QM9 on predicting quantum chemical properties.
arXiv Detail & Related papers (2023-02-02T03:49:57Z) - Graph neural networks for the prediction of molecular structure-property
relationships [59.11160990637615]
Graph neural networks (GNNs) are a novel machine learning method that directly work on the molecular graph.
GNNs allow to learn properties in an end-to-end fashion, thereby avoiding the need for informative descriptors.
We describe the fundamentals of GNNs and demonstrate the application of GNNs via two examples for molecular property prediction.
arXiv Detail & Related papers (2022-07-25T11:30:44Z) - Formula graph self-attention network for representation-domain
independent materials discovery [3.67735033631952]
We introduce a new concept of formula graph which unifies both stoichiometry-only and structure-based material descriptors.
We develop a self-attention integrated GNN that assimilates a formula graph and show that the proposed architecture produces material embeddings transferable between the two domains.
Our model substantially outperforms previous structure-based GNNs as well as structure-agnostic counterparts.
arXiv Detail & Related papers (2022-01-14T19:49:45Z) - Predicting Material Properties Using a 3D Graph Neural Network with
Invariant Local Descriptors [0.4956709222278243]
Accurately predicting material properties is critical for discovering and designing novel materials.
Among the machine learning methods, graph convolution neural networks (GCNNs) have been one of the most successful ones.
We propose an adaptive GCNN with novel convolutions that model interactions among all neighboring atoms in three-dimensional space simultaneously.
arXiv Detail & Related papers (2021-02-16T19:56:54Z) - Graph Neural Network for Hamiltonian-Based Material Property Prediction [56.94118357003096]
We present and compare several different graph convolution networks that are able to predict the band gap for inorganic materials.
The models are developed to incorporate two different features: the information of each orbital itself and the interaction between each other.
The results show that our model can get a promising prediction accuracy with cross-validation.
arXiv Detail & Related papers (2020-05-27T13:32:10Z) - Multi-View Graph Neural Networks for Molecular Property Prediction [67.54644592806876]
We present Multi-View Graph Neural Network (MV-GNN), a multi-view message passing architecture.
In MV-GNN, we introduce a shared self-attentive readout component and disagreement loss to stabilize the training process.
We further boost the expressive power of MV-GNN by proposing a cross-dependent message passing scheme.
arXiv Detail & Related papers (2020-05-17T04:46:07Z) - Global Attention based Graph Convolutional Neural Networks for Improved
Materials Property Prediction [8.371766047183739]
We develop a novel model, GATGNN, for predicting inorganic material properties based on graph neural networks.
We show that our method is able to both outperform the previous models' predictions and provide insight into the crystallization of the material.
arXiv Detail & Related papers (2020-03-11T07:43:14Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.