Every Annotation Counts: Multi-label Deep Supervision for Medical Image
Segmentation
- URL: http://arxiv.org/abs/2104.13243v1
- Date: Tue, 27 Apr 2021 14:51:19 GMT
- Title: Every Annotation Counts: Multi-label Deep Supervision for Medical Image
Segmentation
- Authors: Simon Rei{\ss}, Constantin Seibold, Alexander Freytag, Erik Rodner,
Rainer Stiefelhagen
- Abstract summary: We propose a semi-weakly supervised segmentation algorithm to overcome this barrier.
Our approach is based on a new formulation of deep supervision and student-teacher model.
With our novel training regime for segmentation that flexibly makes use of images that are either fully labeled, marked with bounding boxes, just global labels, or not at all, we are able to cut the requirement for expensive labels by 94.22%.
- Score: 85.0078917060652
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Pixel-wise segmentation is one of the most data and annotation hungry tasks
in our field. Providing representative and accurate annotations is often
mission-critical especially for challenging medical applications. In this
paper, we propose a semi-weakly supervised segmentation algorithm to overcome
this barrier. Our approach is based on a new formulation of deep supervision
and student-teacher model and allows for easy integration of different
supervision signals. In contrast to previous work, we show that care has to be
taken how deep supervision is integrated in lower layers and we present
multi-label deep supervision as the most important secret ingredient for
success. With our novel training regime for segmentation that flexibly makes
use of images that are either fully labeled, marked with bounding boxes, just
global labels, or not at all, we are able to cut the requirement for expensive
labels by 94.22% - narrowing the gap to the best fully supervised baseline to
only 5% mean IoU. Our approach is validated by extensive experiments on retinal
fluid segmentation and we provide an in-depth analysis of the anticipated
effect each annotation type can have in boosting segmentation performance.
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