Generalizable and Robust Deep Learning Algorithm for Atrial Fibrillation
Diagnosis Across Ethnicities, Ages and Sexes
- URL: http://arxiv.org/abs/2207.09667v1
- Date: Wed, 20 Jul 2022 05:49:16 GMT
- Title: Generalizable and Robust Deep Learning Algorithm for Atrial Fibrillation
Diagnosis Across Ethnicities, Ages and Sexes
- Authors: Shany Biton, Mohsin Aldhafeeri, Erez Marcusohn, Kenta Tsutsui, Tom
Szwagier, Adi Elias, Julien Oster, Jean Marc Sellal, Mahmoud Suleiman, and
Joachim A. Behar
- Abstract summary: This study is the first to develop and assess the generalization performance of a deep learning (DL) model for AF events detection.
The model, ArNet2, was developed on a large retrospective dataset of 2,147 patients totaling 51,386 hours of continuous electrocardiogram (ECG)
It was validated on a retrospective dataset of 1,730 consecutives Holter recordings from the Rambam Hospital Holter clinic, Haifa, Israel.
- Score: 0.0
- License: http://creativecommons.org/licenses/by-nc-nd/4.0/
- Abstract: To drive health innovation that meets the needs of all and democratize
healthcare, there is a need to assess the generalization performance of deep
learning (DL) algorithms across various distribution shifts to ensure that
these algorithms are robust. This retrospective study is, to the best of our
knowledge, the first to develop and assess the generalization performance of a
deep learning (DL) model for AF events detection from long term beat-to-beat
intervals across ethnicities, ages and sexes. The new recurrent DL model,
denoted ArNet2, was developed on a large retrospective dataset of 2,147
patients totaling 51,386 hours of continuous electrocardiogram (ECG). The
models generalization was evaluated on manually annotated test sets from four
centers (USA, Israel, Japan and China) totaling 402 patients. The model was
further validated on a retrospective dataset of 1,730 consecutives Holter
recordings from the Rambam Hospital Holter clinic, Haifa, Israel. The model
outperformed benchmark state-of-the-art models and generalized well across
ethnicities, ages and sexes. Performance was higher for female than male and
young adults (less than 60 years old) and showed some differences across
ethnicities. The main finding explaining these variations was an impairment in
performance in groups with a higher prevalence of atrial flutter (AFL). Our
findings on the relative performance of ArNet2 across groups may have clinical
implications on the choice of the preferred AF examination method to use
relative to the group of interest.
Related papers
- SemiHVision: Enhancing Medical Multimodal Models with a Semi-Human Annotated Dataset and Fine-Tuned Instruction Generation [13.672776832197918]
Multimodal large language models (MLLMs) have made significant strides, yet they face challenges in the medical domain due to limited specialized knowledge.
We seek to address this gap at various stages of the end-to-end learning pipeline, including data collection, model fine-tuning, and evaluation.
arXiv Detail & Related papers (2024-10-19T02:35:35Z) - Using Pre-training and Interaction Modeling for ancestry-specific disease prediction in UK Biobank [69.90493129893112]
Recent genome-wide association studies (GWAS) have uncovered the genetic basis of complex traits, but show an under-representation of non-European descent individuals.
Here, we assess whether we can improve disease prediction across diverse ancestries using multiomic data.
arXiv Detail & Related papers (2024-04-26T16:39:50Z) - A Hybrid Transfer Learning Assisted Decision Support System for Accurate
Prediction of Alzheimer Disease [0.0]
Alzheimer's disease is the most common long-term illness in elderly people.
Deep neural model is more accurate and effective than general machine learning.
arXiv Detail & Related papers (2023-10-13T06:48:38Z) - Deep Learning for Predicting Progression of Patellofemoral
Osteoarthritis Based on Lateral Knee Radiographs, Demographic Data and
Symptomatic Assessments [1.1549572298362785]
This study included subjects (1832 subjects, 3276 knees) from the baseline of the MOST study.
PF joint regions-of-interest were identified using an automated landmark detection tool (BoneFinder) on lateral knee X-rays.
Risk factors included age, sex, BMI and WOMAC score, and the radiographic osteoarthritis stage of the tibiofemoral joint (KL score)
arXiv Detail & Related papers (2023-05-10T06:43:33Z) - Clinical Deterioration Prediction in Brazilian Hospitals Based on
Artificial Neural Networks and Tree Decision Models [56.93322937189087]
An extremely boosted neural network (XBNet) is used to predict clinical deterioration (CD)
The XGBoost model obtained the best results in predicting CD among Brazilian hospitals' data.
arXiv Detail & Related papers (2022-12-17T23:29:14Z) - Risk of Bias in Chest Radiography Deep Learning Foundation Models [14.962566915809264]
This study used 127,118 chest radiographs from 42,884 patients (mean age, 63 [SD] 17 years; 23,623 male, 19,261 female) from the CheXpert dataset collected between October 2002 and July 2017.
Ten out of twelve pairwise comparisons across biological sex and race showed statistically significant differences in the studied foundation model.
Significant differences were found between male and female (P .001) and Asian and Black patients (P .001) in the feature projections that primarily capture disease.
arXiv Detail & Related papers (2022-09-07T07:16:30Z) - Bootstrapping Your Own Positive Sample: Contrastive Learning With
Electronic Health Record Data [62.29031007761901]
This paper proposes a novel contrastive regularized clinical classification model.
We introduce two unique positive sampling strategies specifically tailored for EHR data.
Our framework yields highly competitive experimental results in predicting the mortality risk on real-world COVID-19 EHR data.
arXiv Detail & Related papers (2021-04-07T06:02:04Z) - Deep learning-based COVID-19 pneumonia classification using chest CT
images: model generalizability [54.86482395312936]
Deep learning (DL) classification models were trained to identify COVID-19-positive patients on 3D computed tomography (CT) datasets from different countries.
We trained nine identical DL-based classification models by using combinations of the datasets with a 72% train, 8% validation, and 20% test data split.
The models trained on multiple datasets and evaluated on a test set from one of the datasets used for training performed better.
arXiv Detail & Related papers (2021-02-18T21:14:52Z) - Temporal Phenotyping using Deep Predictive Clustering of Disease
Progression [97.88605060346455]
We develop a deep learning approach for clustering time-series data, where each cluster comprises patients who share similar future outcomes of interest.
Experiments on two real-world datasets show that our model achieves superior clustering performance over state-of-the-art benchmarks.
arXiv Detail & Related papers (2020-06-15T20:48:43Z) - Validation and Optimization of Multi-Organ Segmentation on Clinical
Imaging Archives [7.036733782879497]
A 2015 MICCAI challenge spurred substantial innovation in multi-organ abdominal CT segmentation.
Recent innovations in deep methods have driven performance toward levels for which clinical translation is appealing.
Cross-validation on open datasets presents the risk of indirect knowledge contamination and could result in circular reasoning.
arXiv Detail & Related papers (2020-02-10T21:49:42Z) - Opportunities and Challenges of Deep Learning Methods for
Electrocardiogram Data: A Systematic Review [62.490310870300746]
The electrocardiogram (ECG) is one of the most commonly used diagnostic tools in medicine and healthcare.
Deep learning methods have achieved promising results on predictive healthcare tasks using ECG signals.
This paper presents a systematic review of deep learning methods for ECG data from both modeling and application perspectives.
arXiv Detail & Related papers (2019-12-28T02:44:29Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.