Machine Learning 1- and 2-electron reduced density matrices of polymeric
molecules
- URL: http://arxiv.org/abs/2208.04976v1
- Date: Tue, 9 Aug 2022 18:06:07 GMT
- Title: Machine Learning 1- and 2-electron reduced density matrices of polymeric
molecules
- Authors: David Pekker, Chungwen Liang, Sankha Pattanayak, Swagatam Mukhopadhyay
- Abstract summary: We demonstrate the feasibility of a machine learning approach to predicting electronic structure that is generalizable both to new conformations as well as new molecules.
At the same time our work circumvents the N-representability problem that has stymied the adaption of 2RDM methods, by directly machine-learning valid Reduced Density Matrices.
- Score: 0.0
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Encoding the electronic structure of molecules using 2-electron reduced
density matrices (2RDMs) as opposed to many-body wave functions has been a
decades-long quest as the 2RDM contains sufficient information to compute the
exact molecular energy but requires only polynomial storage. We focus on linear
polymers with varying conformations and numbers of monomers and show that we
can use machine learning to predict both the 1-electron and the 2-electron
reduced density matrices. Moreover, by applying the Hamiltonian operator to the
predicted reduced density matrices we show that we can recover the molecular
energy. Thus, we demonstrate the feasibility of a machine learning approach to
predicting electronic structure that is generalizable both to new conformations
as well as new molecules. At the same time our work circumvents the
N-representability problem that has stymied the adaption of 2RDM methods, by
directly machine-learning valid Reduced Density Matrices.
Related papers
- QH9: A Quantum Hamiltonian Prediction Benchmark for QM9 Molecules [69.25826391912368]
We generate a new Quantum Hamiltonian dataset, named as QH9, to provide precise Hamiltonian matrices for 999 or 2998 molecular dynamics trajectories.
We show that current machine learning models have the capacity to predict Hamiltonian matrices for arbitrary molecules.
arXiv Detail & Related papers (2023-06-15T23:39:07Z) - MUDiff: Unified Diffusion for Complete Molecule Generation [104.7021929437504]
We present a new model for generating a comprehensive representation of molecules, including atom features, 2D discrete molecule structures, and 3D continuous molecule coordinates.
We propose a novel graph transformer architecture to denoise the diffusion process.
Our model is a promising approach for designing stable and diverse molecules and can be applied to a wide range of tasks in molecular modeling.
arXiv Detail & Related papers (2023-04-28T04:25:57Z) - Quantum Many-body Theory from a Solution of the $N$-representability
Problem [0.0]
We derive an equation that re-expresses physical constraints on higher-order RDMs to generate direct constraints on the 2-RDM.
We illustrate by computing the ground-state electronic energy and properties of the H$_8$ ring.
arXiv Detail & Related papers (2023-04-17T19:19:31Z) - Molecular Geometry-aware Transformer for accurate 3D Atomic System
modeling [51.83761266429285]
We propose a novel Transformer architecture that takes nodes (atoms) and edges (bonds and nonbonding atom pairs) as inputs and models the interactions among them.
Moleformer achieves state-of-the-art on the initial state to relaxed energy prediction of OC20 and is very competitive in QM9 on predicting quantum chemical properties.
arXiv Detail & Related papers (2023-02-02T03:49:57Z) - Reducing the Quantum Many-electron Problem to Two Electrons with Machine
Learning [0.0]
We introduce a new paradigm for electronic structure where approximate geminal-occupation distributions are learned'' via a convolutional neural network.
We show that the neural network learns the $N$-representability conditions, constraints on the distribution for it to represent an $N$-electron system.
arXiv Detail & Related papers (2022-12-29T16:30:37Z) - Exact solutions to the quantum many-body problem using the geminal
density matrix [0.0]
Two-body reduced density matrix (2-RDM) formalism reduces coordinate dependence to that of four particles.
Errors arise in this approach because the 2-RDM cannot practically be constrained to guarantee that it corresponds to a valid wave function.
We show how this technique is used to diagonalize atomic Hamiltonians, finding that the problem reduces to the solution of $sim N(N-1)/2$ two-electron eigenstates of the Helium atom.
arXiv Detail & Related papers (2021-12-21T18:04:11Z) - Relativistic aspects of orbital and magnetic anisotropies in the
chemical bonding and structure of lanthanide molecules [60.17174832243075]
We study the electronic and ro-vibrational states of heavy homonuclear lanthanide Er2 and Tm2 molecules by applying state-of-the-art relativistic methods.
We were able to obtain reliable spin-orbit and correlation-induced splittings between the 91 Er2 and 36 Tm2 electronic potentials dissociating to two ground-state atoms.
arXiv Detail & Related papers (2021-07-06T15:34:00Z) - Computing molecular excited states on a D-Wave quantum annealer [52.5289706853773]
We demonstrate the use of a D-Wave quantum annealer for the calculation of excited electronic states of molecular systems.
These simulations play an important role in a number of areas, such as photovoltaics, semiconductor technology and nanoscience.
arXiv Detail & Related papers (2021-07-01T01:02:17Z) - BIGDML: Towards Exact Machine Learning Force Fields for Materials [55.944221055171276]
Machine-learning force fields (MLFF) should be accurate, computationally and data efficient, and applicable to molecules, materials, and interfaces thereof.
Here, we introduce the Bravais-Inspired Gradient-Domain Machine Learning approach and demonstrate its ability to construct reliable force fields using a training set with just 10-200 atoms.
arXiv Detail & Related papers (2021-06-08T10:14:57Z) - Dual-Cone Variational Calculation of the 2-Electron Reduced Density
Matrix [0.0]
Variational calculation of the two-electron reduced density matrix (2RDM) without the many-electron wave function exploits the pairwise nature of the electronic Coulomb interaction.
Here we generalize the dual-cone variational 2-RDM method to compute not only the ground-state energy but also the 2-RDM.
We apply the method to computing the energies and properties of strongly correlated electrons in an illustrative hydrogen chain and the nitrogen-fixation catalyst FeMoco.
arXiv Detail & Related papers (2021-03-31T15:20:34Z) - Machine Learning a Molecular Hamiltonian for Predicting Electron
Dynamics [1.933681537640272]
We develop a computational method to learn a molecular Hamiltonian matrix from matrix-valued time series of the electron density.
The resulting Hamiltonians can be used for electron density evolution, producing highly accurate results even when propagating 1000 time steps beyond the training data.
arXiv Detail & Related papers (2020-07-19T23:18:08Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.