Non-inferiority of Deep Learning Acute Ischemic Stroke Segmentation on
Non-Contrast CT Compared to Expert Neuroradiologists
- URL: http://arxiv.org/abs/2211.15341v3
- Date: Thu, 7 Sep 2023 17:18:52 GMT
- Title: Non-inferiority of Deep Learning Acute Ischemic Stroke Segmentation on
Non-Contrast CT Compared to Expert Neuroradiologists
- Authors: Sophie Ostmeier, Brian Axelrod, Benjamin F.J. Verhaaren, Soren
Christensen, Abdelkader Mahammedi, Yongkai Liu, Benjamin Pulli, Li-Jia Li,
Greg Zaharchuk, Jeremy J. Heit
- Abstract summary: Three experienced neuroradiologists independently segmented hypodensity that reflected the ischemic core on each scan.
A 3-dimensional CNN architecture was trained and optimized to predict the segmentations of expert A from NCCT.
The CNN accurately delineates the hypodense ischemic core on NCCT in acute ischemic stroke patients with an accuracy comparable to neuroradiologists.
- Score: 5.584243195984352
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: To determine if a convolutional neural network (CNN) deep learning model can
accurately segment acute ischemic changes on non-contrast CT compared to
neuroradiologists. Non-contrast CT (NCCT) examinations from 232 acute ischemic
stroke patients who were enrolled in the DEFUSE 3 trial were included in this
study. Three experienced neuroradiologists independently segmented hypodensity
that reflected the ischemic core on each scan. The neuroradiologist with the
most experience (expert A) served as the ground truth for deep learning model
training. Two additional neuroradiologists (experts B and C) segmentations were
used for data testing. The 232 studies were randomly split into training and
test sets. The training set was further randomly divided into 5 folds with
training and validation sets. A 3-dimensional CNN architecture was trained and
optimized to predict the segmentations of expert A from NCCT. The performance
of the model was assessed using a set of volume, overlap, and distance metrics
using non-inferiority thresholds of 20%, 3ml, and 3mm. The optimized model
trained on expert A was compared to test experts B and C. We used a one-sided
Wilcoxon signed-rank test to test for the non-inferiority of the model-expert
compared to the inter-expert agreement. The final model performance for the
ischemic core segmentation task reached a performance of 0.46+-0.09 Surface
Dice at Tolerance 5mm and 0.47+-0.13 Dice when trained on expert A. Compared to
the two test neuroradiologists the model-expert agreement was non-inferior to
the inter-expert agreement, p < 0.05. The CNN accurately delineates the
hypodense ischemic core on NCCT in acute ischemic stroke patients with an
accuracy comparable to neuroradiologists.
Related papers
- Brain Tumor Classification on MRI in Light of Molecular Markers [61.77272414423481]
Co-deletion of the 1p/19q gene is associated with clinical outcomes in low-grade gliomas.
This study aims to utilize a specially MRI-based convolutional neural network for brain cancer detection.
arXiv Detail & Related papers (2024-09-29T07:04:26Z) - The effect of data augmentation and 3D-CNN depth on Alzheimer's Disease
detection [51.697248252191265]
This work summarizes and strictly observes best practices regarding data handling, experimental design, and model evaluation.
We focus on Alzheimer's Disease (AD) detection, which serves as a paradigmatic example of challenging problem in healthcare.
Within this framework, we train predictive 15 models, considering three different data augmentation strategies and five distinct 3D CNN architectures.
arXiv Detail & Related papers (2023-09-13T10:40:41Z) - Random Expert Sampling for Deep Learning Segmentation of Acute Ischemic
Stroke on Non-contrast CT [2.0296858917615856]
The data set consisted of 260 Non-Contrast CTs from 233 patients of acute ischemic stroke patients recruited in the DEFUSE 3 trial.
A benchmark U-Net was trained on the reference annotations of three experienced neuroradiologists to segment ischemic brain tissue using majority vote and random expert sampling training schemes.
A model trained on random expert sampling can identify the presence and location of acute ischemic brain tissue on Non-Contrast CT similar to CT perfusion and with better consistency than experts.
arXiv Detail & Related papers (2023-09-07T16:59:38Z) - The use of deep learning enables high diagnostic accuracy in detecting
syndesmotic instability on weight-bearing CT scanning [0.0]
Delayed diagnosis of syndesmotic instability can lead to significant morbidity and accelerated change in the ankle joint.
Weight-bearing computed tomography (WBCT) has shown promising potential for early and reliable detection of isolated syndesmotic instability.
We developed three deep learning (DL) models for analyzing WBCT scans to recognize syndesmosis instability.
arXiv Detail & Related papers (2022-07-07T20:49:37Z) - Advancing COVID-19 Diagnosis with Privacy-Preserving Collaboration in
Artificial Intelligence [79.038671794961]
We launch the Unified CT-COVID AI Diagnostic Initiative (UCADI), where the AI model can be distributedly trained and independently executed at each host institution.
Our study is based on 9,573 chest computed tomography scans (CTs) from 3,336 patients collected from 23 hospitals located in China and the UK.
arXiv Detail & Related papers (2021-11-18T00:43:41Z) - Multi-institutional Validation of Two-Streamed Deep Learning Method for
Automated Delineation of Esophageal Gross Tumor Volume using planning-CT and
FDG-PETCT [14.312659667401302]
Current clinical workflow for esophageal gross tumor volume (GTV) contouring relies on manual delineation of high labor-costs and interuser variability.
To validate the clinical applicability of a deep learning (DL) multi-modality esophageal GTV contouring model, developed at 1 institution whereas tested at multiple ones.
arXiv Detail & Related papers (2021-10-11T13:56:09Z) - Deep learning-based COVID-19 pneumonia classification using chest CT
images: model generalizability [54.86482395312936]
Deep learning (DL) classification models were trained to identify COVID-19-positive patients on 3D computed tomography (CT) datasets from different countries.
We trained nine identical DL-based classification models by using combinations of the datasets with a 72% train, 8% validation, and 20% test data split.
The models trained on multiple datasets and evaluated on a test set from one of the datasets used for training performed better.
arXiv Detail & Related papers (2021-02-18T21:14:52Z) - A Deep Learning-Based Approach to Extracting Periosteal and Endosteal
Contours of Proximal Femur in Quantitative CT Images [25.76523855274612]
A three-dimensional (3D) end-to-end fully convolutional neural network was developed for our segmentation task.
Two models with the same network structures were trained and they achieved a dice similarity coefficient (DSC) of 97.87% and 96.49% for the periosteal and endosteal contours, respectively.
It demonstrated a strong potential for clinical use, including the hip fracture risk prediction and finite element analysis.
arXiv Detail & Related papers (2021-02-03T10:23:41Z) - CovidDeep: SARS-CoV-2/COVID-19 Test Based on Wearable Medical Sensors
and Efficient Neural Networks [51.589769497681175]
The novel coronavirus (SARS-CoV-2) has led to a pandemic.
The current testing regime based on Reverse Transcription-Polymerase Chain Reaction for SARS-CoV-2 has been unable to keep up with testing demands.
We propose a framework called CovidDeep that combines efficient DNNs with commercially available WMSs for pervasive testing of the virus.
arXiv Detail & Related papers (2020-07-20T21:47:28Z) - Segmentation of the Myocardium on Late-Gadolinium Enhanced MRI based on
2.5 D Residual Squeeze and Excitation Deep Learning Model [55.09533240649176]
The aim of this work is to develop an accurate automatic segmentation method based on deep learning models for the myocardial borders on LGE-MRI.
A total number of 320 exams (with a mean number of 6 slices per exam) were used for training and 28 exams used for testing.
The performance analysis of the proposed ensemble model in the basal and middle slices was similar as compared to intra-observer study and slightly lower at apical slices.
arXiv Detail & Related papers (2020-05-27T20:44:38Z) - Handling Missing MRI Input Data in Deep Learning Segmentation of Brain
Metastases: A Multi-Center Study [1.4463443378902883]
A deep learning based segmentation model for automatic segmentation of brain metastases, named DropOut, was trained on multi-sequence MRI.
The segmentation results were compared with the performance of a state-of-the-art DeepLabV3 model.
The DropOut model showed a significantly higher score compared to the DeepLabV3 model.
arXiv Detail & Related papers (2019-12-27T02:49:45Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.