Shotgun crystal structure prediction using machine-learned formation energies
- URL: http://arxiv.org/abs/2305.02158v5
- Date: Tue, 20 Aug 2024 10:41:52 GMT
- Title: Shotgun crystal structure prediction using machine-learned formation energies
- Authors: Chang Liu, Hiromasa Tamaki, Tomoyasu Yokoyama, Kensuke Wakasugi, Satoshi Yotsuhashi, Minoru Kusaba, Artem R. Oganov, Ryo Yoshida,
- Abstract summary: Crystal structures of assembled atoms can be predicted by finding the global or local minima of the energy surface within a broad space of atomic configurations.
Here, we present significant progress toward solving the crystal structure prediction problem.
We performed noniterative, single-shot screening using a large library of virtually created crystal structures with a machine-learning energy predictor.
- Score: 3.2563787689949133
- License: http://arxiv.org/licenses/nonexclusive-distrib/1.0/
- Abstract: Stable or metastable crystal structures of assembled atoms can be predicted by finding the global or local minima of the energy surface within a broad space of atomic configurations. Generally, this requires repeated first-principles energy calculations, which is often impractical for large crystalline systems. Here, we present significant progress toward solving the crystal structure prediction problem: we performed noniterative, single-shot screening using a large library of virtually created crystal structures with a machine-learning energy predictor. This shotgun method (ShotgunCSP) has two key technical components: transfer learning for accurate energy prediction of pre-relaxed crystalline states, and two generative models based on element substitution and symmetry-restricted structure generation to produce promising and diverse crystal structures. First-principles calculations were performed only to generate the training samples and to refine a few selected pre-relaxed crystal structures. The ShotunCSP method is computationally less intensive than conventional methods and exhibits exceptional prediction accuracy, reaching 93.3% in benchmark tests with 90 different crystal structures.
Related papers
- Generative Hierarchical Materials Search [91.93125016916463]
We propose Generative Hierarchical Materials Search (GenMS) for controllable generation of crystal structures.
GenMS consists of (1) a language model that takes high-level natural language as input and generates intermediate textual information about a crystal.
GenMS additionally uses a graph neural network to predict properties (e.g., formation energy) from the generated crystal structures.
arXiv Detail & Related papers (2024-09-10T17:51:28Z) - AlphaCrystal-II: Distance matrix based crystal structure prediction using deep learning [4.437756445215657]
We present AlphaCrystal-II, a novel knowledge-based solution that exploits the abundant inter-atomic interaction patterns found in existing crystal structures.
By leveraging the wealth of inter-atomic relationships of known crystal structures, our approach demonstrates remarkable effectiveness and reliability in structure prediction.
arXiv Detail & Related papers (2024-04-07T05:17:43Z) - Complete and Efficient Graph Transformers for Crystal Material Property Prediction [53.32754046881189]
Crystal structures are characterized by atomic bases within a primitive unit cell that repeats along a regular lattice throughout 3D space.
We introduce a novel approach that utilizes the periodic patterns of unit cells to establish the lattice-based representation for each atom.
We propose ComFormer, a SE(3) transformer designed specifically for crystalline materials.
arXiv Detail & Related papers (2024-03-18T15:06:37Z) - Scalable Diffusion for Materials Generation [99.71001883652211]
We develop a unified crystal representation that can represent any crystal structure (UniMat)
UniMat can generate high fidelity crystal structures from larger and more complex chemical systems.
We propose additional metrics for evaluating generative models of materials.
arXiv Detail & Related papers (2023-10-18T15:49:39Z) - Latent Conservative Objective Models for Data-Driven Crystal Structure
Prediction [62.36797874900395]
In computational chemistry, crystal structure prediction is an optimization problem.
One approach to tackle this problem involves building simulators based on density functional theory (DFT) followed by running search in simulation.
We show that our approach, dubbed LCOMs (latent conservative objective models), performs comparably to the best current approaches in terms of success rate of structure prediction.
arXiv Detail & Related papers (2023-10-16T04:35:44Z) - Data-Driven Score-Based Models for Generating Stable Structures with
Adaptive Crystal Cells [1.515687944002438]
This work aims at the generation of new crystal structures with desired properties, such as chemical stability and specified chemical composition.
The novelty of the presented approach resides in the fact that the lattice of the crystal cell is not fixed.
A multigraph crystal representation is introduced that respects symmetry constraints, yielding computational advantages.
arXiv Detail & Related papers (2023-10-16T02:53:24Z) - Crystal-GFN: sampling crystals with desirable properties and constraints [103.79058968784163]
We introduce Crystal-GFN, a generative model of crystal structures that sequentially samples structural properties of crystalline materials.
In this paper, we use as objective the formation energy per atom of a crystal structure predicted by a new proxy machine learning model trained on MatBench.
The results demonstrate that Crystal-GFN is able to sample highly diverse crystals with low (median -3.1 eV/atom) predicted formation energy.
arXiv Detail & Related papers (2023-10-07T21:36:55Z) - Equivariant Parameter Sharing for Porous Crystalline Materials [4.271235935891555]
Existing methods for crystal property prediction either have constraints that are too restrictive or only incorporate symmetries between unit cells.
We develop a model which incorporates the symmetries of the unit cell of a crystal in its architecture and explicitly models the porous structure.
Our results confirm that our method performs better than existing methods for crystal property prediction and that the inclusion of symmetry results in a more efficient model.
arXiv Detail & Related papers (2023-04-04T08:33:13Z) - Disentangling multiple scattering with deep learning: application to
strain mapping from electron diffraction patterns [48.53244254413104]
We implement a deep neural network called FCU-Net to invert highly nonlinear electron diffraction patterns into quantitative structure factor images.
We trained the FCU-Net using over 200,000 unique dynamical diffraction patterns which include many different combinations of crystal structures.
Our simulated diffraction pattern library, implementation of FCU-Net, and trained model weights are freely available in open source repositories.
arXiv Detail & Related papers (2022-02-01T03:53:39Z) - Crystal structure prediction with machine learning-based element
substitution [5.613512701893759]
The prediction of energetically stable crystal structures formed by a given chemical composition is a central problem in solid-state physics.
Here, we present a unique methodology for crystal structure prediction that relies on a machine learning algorithm called metric learning.
For a given query composition with an unknown crystal structure, the model is used to automatically select from a crystal structure database a set of template crystals.
arXiv Detail & Related papers (2022-01-26T21:06:24Z) - An invertible crystallographic representation for general inverse design
of inorganic crystals with targeted properties [10.853822721106205]
We present a framework capable of general inverse design (not limited to a given set of elements or crystal structures)
The framework generates new crystals with user-defined formation energies, bandgap, thermoelectric (TE) power factor, and combinations thereof.
Results represent a significant step toward property-driven general inverse design using generative models.
arXiv Detail & Related papers (2020-05-15T15:58:31Z)
This list is automatically generated from the titles and abstracts of the papers in this site.
This site does not guarantee the quality of this site (including all information) and is not responsible for any consequences.